Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22b13
         (784 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U72514-1|AAC51641.1|  239|Homo sapiens C2f protein.                   294   3e-79
BC055314-1|AAH55314.1|  244|Homo sapiens EMG1 nucleolar protein ...   294   3e-79
U47924-20|AAB51325.1|  151|Homo sapiens C2f protein.                  217   4e-56

>U72514-1|AAC51641.1|  239|Homo sapiens C2f protein.
          Length = 239

 Score =  294 bits (721), Expect = 3e-79
 Identities = 137/189 (72%), Positives = 158/189 (83%)
 Frame = +1

Query: 217 KRLIVILENAQLESVKNGNSFELLNCDDHGHILRKNDRDPGSCRPDITHQSLLMLMDSPL 396
           +RLIV+LE A LE+VK G ++ELLNCD H  IL KN RDPG  RPDITHQSLLMLMDSPL
Sbjct: 36  RRLIVVLEGASLETVKVGKTYELLNCDKHKSILLKNGRDPGEARPDITHQSLLMLMDSPL 95

Query: 397 NRAGLLQVYIHTEKNVLIEINPQTRIPRTFKRFAGLMVQLLHKFAIRASDGPMKLLKVIK 576
           NRAGLLQVYIHT+KNVLIE+NPQTRIPRTF RF GLMVQLLHK ++RA+DGP KLLKVIK
Sbjct: 96  NRAGLLQVYIHTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIK 155

Query: 577 NPVTSHLPVGVKKITMSFSSKIVQNCRDLVPKDEPIVMVIGAMAHGKVEVDYSEDVISIS 756
           NPV+ H PVG  K+  SFS  +V + R+LVP  +PIV V+GA AHGKV V+Y+E ++SIS
Sbjct: 156 NPVSDHFPVGCMKVGTSFSIPVVSDVRELVPSSDPIVFVVGAFAHGKVSVEYTEKMVSIS 215

Query: 757 NYPLSAALT 783
           NYPLSAALT
Sbjct: 216 NYPLSAALT 224


>BC055314-1|AAH55314.1|  244|Homo sapiens EMG1 nucleolar protein
           homolog (S. cerevisiae) protein.
          Length = 244

 Score =  294 bits (721), Expect = 3e-79
 Identities = 137/189 (72%), Positives = 158/189 (83%)
 Frame = +1

Query: 217 KRLIVILENAQLESVKNGNSFELLNCDDHGHILRKNDRDPGSCRPDITHQSLLMLMDSPL 396
           +RLIV+LE A LE+VK G ++ELLNCD H  IL KN RDPG  RPDITHQSLLMLMDSPL
Sbjct: 41  RRLIVVLEGASLETVKVGKTYELLNCDKHKSILLKNGRDPGEARPDITHQSLLMLMDSPL 100

Query: 397 NRAGLLQVYIHTEKNVLIEINPQTRIPRTFKRFAGLMVQLLHKFAIRASDGPMKLLKVIK 576
           NRAGLLQVYIHT+KNVLIE+NPQTRIPRTF RF GLMVQLLHK ++RA+DGP KLLKVIK
Sbjct: 101 NRAGLLQVYIHTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIK 160

Query: 577 NPVTSHLPVGVKKITMSFSSKIVQNCRDLVPKDEPIVMVIGAMAHGKVEVDYSEDVISIS 756
           NPV+ H PVG  K+  SFS  +V + R+LVP  +PIV V+GA AHGKV V+Y+E ++SIS
Sbjct: 161 NPVSDHFPVGCMKVGTSFSIPVVSDVRELVPSSDPIVFVVGAFAHGKVSVEYTEKMVSIS 220

Query: 757 NYPLSAALT 783
           NYPLSAALT
Sbjct: 221 NYPLSAALT 229


>U47924-20|AAB51325.1|  151|Homo sapiens C2f protein.
          Length = 151

 Score =  217 bits (530), Expect = 4e-56
 Identities = 100/136 (73%), Positives = 116/136 (85%)
 Frame = +1

Query: 376 MLMDSPLNRAGLLQVYIHTEKNVLIEINPQTRIPRTFKRFAGLMVQLLHKFAIRASDGPM 555
           MLMDSPLNRAGLLQVYIHT+KNVLIE+NPQTRIPRTF RF GLMVQLLHK ++RA+DGP 
Sbjct: 1   MLMDSPLNRAGLLQVYIHTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQ 60

Query: 556 KLLKVIKNPVTSHLPVGVKKITMSFSSKIVQNCRDLVPKDEPIVMVIGAMAHGKVEVDYS 735
           KLLKVIKNPV+ H PVG  K+  SFS  +V + R+LVP  +PIV V+GA AHGKV V+Y+
Sbjct: 61  KLLKVIKNPVSDHFPVGCMKVGTSFSIPVVSDVRELVPSSDPIVFVVGAFAHGKVSVEYT 120

Query: 736 EDVISISNYPLSAALT 783
           E ++SISNYPLSAALT
Sbjct: 121 EKMVSISNYPLSAALT 136


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,197,622
Number of Sequences: 237096
Number of extensions: 2207216
Number of successful extensions: 4530
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4530
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)