Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22b11
(526 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q90176 Cluster: Putative 15 kDa capsid protein; n=5; Nu... 244 1e-63
UniRef50_O10338 Cluster: Putative 15 kDa capsid protein; n=4; Nu... 89 6e-17
UniRef50_Q90173 Cluster: Zinc finger protein CG30; n=5; Nucleopo... 47 2e-04
UniRef50_Q6VTQ9 Cluster: Putative viral capsid protein; n=2; Nuc... 45 0.001
UniRef50_Q6FKW4 Cluster: Similar to sp|P25356 Saccharomyces cere... 36 0.75
UniRef50_A0DRX8 Cluster: Chromosome undetermined scaffold_61, wh... 35 1.3
UniRef50_Q899Q5 Cluster: Putative uncharacterized protein; n=1; ... 33 3.0
UniRef50_Q46Y03 Cluster: Response regulator receiver:CheW-like p... 33 3.0
UniRef50_Q55C59 Cluster: Putative uncharacterized protein; n=1; ... 33 3.0
UniRef50_Q5CT84 Cluster: Putative uncharacterized protein; n=2; ... 33 4.0
UniRef50_Q1Q7X8 Cluster: Peptidase S45, penicillin amidase precu... 33 5.3
UniRef50_Q8II57 Cluster: Structural maintenance of chromosome pr... 32 7.0
UniRef50_A5UND9 Cluster: Lipopolysaccharide cholinephosphotransf... 32 7.0
UniRef50_Q56VE8 Cluster: RteC; n=4; Bacteroidales|Rep: RteC - Ba... 32 9.3
UniRef50_A4EBR1 Cluster: Putative uncharacterized protein; n=1; ... 32 9.3
>UniRef50_Q90176 Cluster: Putative 15 kDa capsid protein; n=5;
Nucleopolyhedrovirus|Rep: Putative 15 kDa capsid protein
- Bombyx mori nuclear polyhedrosis virus (BmNPV)
Length = 126
Score = 244 bits (596), Expect = 1e-63
Identities = 113/124 (91%), Positives = 113/124 (91%)
Frame = +2
Query: 23 MNTRGCVNNNKMIFMNALGLQPQSKVKIIAHKTLEKFKRDAYTRFKGVKAIKNELKTYNL 202
MNTRGCVNNNKMIFMNALGLQPQSKVKIIAHKTLEKFKRDAYT FKGVKAIKNELKTYNL
Sbjct: 1 MNTRGCVNNNKMIFMNALGLQPQSKVKIIAHKTLEKFKRDAYTCFKGVKAIKNELKTYNL 60
Query: 203 TLQQYNEALNQCALNDSRWRDTNNWHHDIKEGVKINKRHIYRVNFNSKTXXXXXXXXXXV 382
TLQQYNEALNQCALNDSRWRDTNNWHHDIKEGVKINKRHIYRVNFNSKT V
Sbjct: 61 TLQQYNEALNQCALNDSRWRDTNNWHHDIKEGVKINKRHIYRVNFNSKTKEIKEYYYIKV 120
Query: 383 ECYV 394
ECYV
Sbjct: 121 ECYV 124
>UniRef50_O10338 Cluster: Putative 15 kDa capsid protein; n=4;
Nucleopolyhedrovirus|Rep: Putative 15 kDa capsid protein
- Orgyia pseudotsugata multicapsid polyhedrosis virus
(OpMNPV)
Length = 120
Score = 89.0 bits (211), Expect = 6e-17
Identities = 46/124 (37%), Positives = 69/124 (55%)
Frame = +2
Query: 23 MNTRGCVNNNKMIFMNALGLQPQSKVKIIAHKTLEKFKRDAYTRFKGVKAIKNELKTYNL 202
M TR ++K+ F ALGL+PQ ++ +A K Y RFKGV IK EL +NL
Sbjct: 1 MRTRSVDQDSKLCFFKALGLRPQEPLRRVACSVANKCAAKQYKRFKGVADIKRELGRFNL 60
Query: 203 TLQQYNEALNQCALNDSRWRDTNNWHHDIKEGVKINKRHIYRVNFNSKTXXXXXXXXXXV 382
Q+NEAL C +++ W T+NW + G +N+RH+Y V+F+++T V
Sbjct: 61 PPAQFNEALYLCRRHNAAWCTTDNWD---RCG-SVNERHVYEVDFDAQTKAVTERFYVCV 116
Query: 383 ECYV 394
+C+V
Sbjct: 117 QCFV 120
>UniRef50_Q90173 Cluster: Zinc finger protein CG30; n=5;
Nucleopolyhedrovirus|Rep: Zinc finger protein CG30 -
Bombyx mori nuclear polyhedrosis virus (BmNPV)
Length = 266
Score = 47.2 bits (107), Expect = 2e-04
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -3
Query: 518 LIKHKNLLQNEYTTLQSYKC 459
LIKHKNLLQNEYTTLQSYKC
Sbjct: 232 LIKHKNLLQNEYTTLQSYKC 251
>UniRef50_Q6VTQ9 Cluster: Putative viral capsid protein; n=2;
Nucleopolyhedrovirus|Rep: Putative viral capsid protein
- Choristoneura fumiferana defective polyhedrosis virus
(Cfdef)
Length = 77
Score = 44.8 bits (101), Expect = 0.001
Identities = 26/69 (37%), Positives = 37/69 (53%)
Frame = +2
Query: 23 MNTRGCVNNNKMIFMNALGLQPQSKVKIIAHKTLEKFKRDAYTRFKGVKAIKNELKTYNL 202
M T N +K+IF+ AL LQP VK + + EK T V IK +L+ ++L
Sbjct: 1 MQTNSSNNASKLIFLKALDLQPCDPVKCVIYNIAEKCSAGLAT----VATIKRKLRCFDL 56
Query: 203 TLQQYNEAL 229
T Q++EAL
Sbjct: 57 TQDQFDEAL 65
>UniRef50_Q6FKW4 Cluster: Similar to sp|P25356 Saccharomyces
cerevisiae YCR032w; n=1; Candida glabrata|Rep: Similar
to sp|P25356 Saccharomyces cerevisiae YCR032w - Candida
glabrata (Yeast) (Torulopsis glabrata)
Length = 2089
Score = 35.5 bits (78), Expect = 0.75
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +2
Query: 167 KAIKNELKTYNLTLQQYNEALNQCALNDSRWRDTNNWHHDIKEGVKINKRHIYRVNFNSK 346
+A+ L T N+ + +NE L Q A + R TNNW+H I G + K IY+ F +
Sbjct: 309 EAVITSLTTLNI-INMFNEDLMQYAGTNER--KTNNWNHRIPIGKNLEKFLIYQYTFEEQ 365
>UniRef50_A0DRX8 Cluster: Chromosome undetermined scaffold_61, whole
genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_61, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 4195
Score = 34.7 bits (76), Expect = 1.3
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +2
Query: 101 KIIAHKTLEKFKRDAYTRFKGVKAIKNELKTYNLTLQQYNEALNQCALNDSRWRDTNNWH 280
++I+ +K ++D+ +K + Y+L+ +YN+ L +NDS W+D N +
Sbjct: 994 RLISSFNPQKEEQDSSNSMVNLKFTQFLQFFYSLSNAEYNKGLKPDIINDSIWQDIKNAY 1053
Query: 281 HDIKE 295
D KE
Sbjct: 1054 KDTKE 1058
>UniRef50_Q899Q5 Cluster: Putative uncharacterized protein; n=1;
Clostridium tetani|Rep: Putative uncharacterized protein
- Clostridium tetani
Length = 510
Score = 33.5 bits (73), Expect = 3.0
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 9/122 (7%)
Frame = +2
Query: 2 SVILYNIMNTRGCVNNNKMIFMNALGLQPQSKVKIIAHKTLEKFKRDAYTRFKGVKAIKN 181
S++L+ + C N + I + +KV+ + K EKF D T V+ N
Sbjct: 19 SLMLFTFLFNSNCKVNAETI-KDVNNTNEINKVENTSDKKEEKFPLDKSTLLNSVEIKSN 77
Query: 182 ELKTYNLTLQQ------YNEALNQCALNDSRWRDTNNWHHDIKEGVKINK--RHIYRVN- 334
YN + Q YN LN AL S +D ++W D+ G +N+ +++VN
Sbjct: 78 YNPIYNNRIVQFEVNSNYNNKLNYRALLHS--KDKDSW-QDVTSGYTLNRNGNEVFQVNL 134
Query: 335 FN 340
FN
Sbjct: 135 FN 136
>UniRef50_Q46Y03 Cluster: Response regulator receiver:CheW-like
protein:ATP-binding region, ATPase-like:Hpt; n=1;
Ralstonia eutropha JMP134|Rep: Response regulator
receiver:CheW-like protein:ATP-binding region,
ATPase-like:Hpt - Ralstonia eutropha (strain JMP134)
(Alcaligenes eutrophus)
Length = 1956
Score = 33.5 bits (73), Expect = 3.0
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 140 DAYTRFKGVKAIKNELKTYNLTLQQYNEALNQCALNDSRWRDTNN 274
DA FK + I+ L YN+ LQ+ ++ L Q A + S WR N+
Sbjct: 924 DADDNFKVIGPIRIGLPLYNVYLQEADDLLRQFATDISEWRHENH 968
>UniRef50_Q55C59 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1010
Score = 33.5 bits (73), Expect = 3.0
Identities = 23/113 (20%), Positives = 49/113 (43%), Gaps = 1/113 (0%)
Frame = +2
Query: 5 VILYNIMNTRGCVNNNKMIFMNALGLQPQSKVKIIAHKTLEKFKRDAYTRFKGVKAIKNE 184
+I+ ++ + + NN + + ++++ +K E +K +T+ +K +
Sbjct: 664 IIILSLCLSFKIMKNNHQQLSTTTTAKYKELIELLGNKEKE-YKPIYHTKSISIKRLSTL 722
Query: 185 LKTYNLTLQQYNEALNQC-ALNDSRWRDTNNWHHDIKEGVKINKRHIYRVNFN 340
+ + N LQ YN+ LNQC + D + N + + E N+ N N
Sbjct: 723 INSNNKLLQFYNDQLNQCNEIKDENENENENENENENENENENENENENENEN 775
>UniRef50_Q5CT84 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 800
Score = 33.1 bits (72), Expect = 4.0
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +2
Query: 17 NIMNTRGCVNN---NKMIFMNALGLQPQSKVKIIAHKTLEKFKRDAYTRFKGVKAIKNEL 187
NI + G VNN N++ M G+ P S +I L + ++G + I+
Sbjct: 547 NIQKSSGSVNNIKDNELNIMLLQGMNPYSGPEIKIEYDLSELYNSERNLYRG-EGIEKTW 605
Query: 188 KTYNLTLQQYNEALNQ 235
K+Y +L+ Y +A+NQ
Sbjct: 606 KSYYDSLKNYQDAVNQ 621
>UniRef50_Q1Q7X8 Cluster: Peptidase S45, penicillin amidase
precursor; n=1; Psychrobacter cryohalolentis K5|Rep:
Peptidase S45, penicillin amidase precursor -
Psychrobacter cryohalolentis (strain K5)
Length = 819
Score = 32.7 bits (71), Expect = 5.3
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +2
Query: 134 KRDAYTRFKGVKAIKNELKTYNLTLQQYNEALNQCALNDS--RWRDTNNWHHDIKEGVKI 307
+RD T +K N+ T N+ + QY LN LN + W D NN + I++
Sbjct: 332 QRDIETVPVTIKMPNNQTMTRNIYVSQYGPILNAKLLNPNLPAWGDANNVVYTIRDAASE 391
Query: 308 NKR 316
N R
Sbjct: 392 NPR 394
>UniRef50_Q8II57 Cluster: Structural maintenance of chromosome
protein, putative; n=5; Plasmodium|Rep: Structural
maintenance of chromosome protein, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1818
Score = 32.3 bits (70), Expect = 7.0
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +2
Query: 113 HKTLEKFKRDAYTRFKGVKAIKNELKTYNLTLQQY----NEALNQCALNDSRWRDTNNWH 280
++ L + + + T F+ + I+N+++ +Q Y N+ +N+C +N TNN
Sbjct: 1390 NQELNQLRDNINTNFEKYEHIENKIENCQKKIQIYTQFINDLINECDINSVNIFLTNNLL 1449
Query: 281 HDIKEGVKINK 313
DI + V IN+
Sbjct: 1450 KDIHDQVDINQ 1460
>UniRef50_A5UND9 Cluster: Lipopolysaccharide
cholinephosphotransferase, LicD family; n=1;
Methanobrevibacter smithii ATCC 35061|Rep:
Lipopolysaccharide cholinephosphotransferase, LicD
family - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 346
Score = 32.3 bits (70), Expect = 7.0
Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Frame = +2
Query: 11 LYNIMNTRGCVNNNKMIFMNALGLQPQSKVKI-----IAHKTLEKFKRD-AYTRFKGVKA 172
+Y++ + G +++NK F+ L+P K+ + + + LE FK+D T++K +
Sbjct: 160 VYDVDDENGFLDDNKFSFLQIAWLKPYVKIDLFPKDYLLEEKLESFKKDYVSTKYKFNQD 219
Query: 173 IKNELKTY 196
+KN K +
Sbjct: 220 VKNGKKVF 227
>UniRef50_Q56VE8 Cluster: RteC; n=4; Bacteroidales|Rep: RteC -
Bacteroides fragilis
Length = 217
Score = 31.9 bits (69), Expect = 9.3
Identities = 23/81 (28%), Positives = 37/81 (45%)
Frame = +2
Query: 8 ILYNIMNTRGCVNNNKMIFMNALGLQPQSKVKIIAHKTLEKFKRDAYTRFKGVKAIKNEL 187
++Y I + GC+NN M P ++ + +K +D Y + +K KNE
Sbjct: 141 LIYGI-DVMGCINNGNM---------PLKQLAPLLYKIFGVDSKDCYRFYTDIKRRKNES 190
Query: 188 KTYNLTLQQYNEALNQCALND 250
+TY + Q E LN+ L D
Sbjct: 191 RTYFIDRMQ--EKLNERMLRD 209
>UniRef50_A4EBR1 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 407
Score = 31.9 bits (69), Expect = 9.3
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 107 IAHKTLEKFKRDAYTRFKGVKAIKNELKTYNLTLQQYNEALNQ 235
++ + +EK +DA G KA K LKTY T Y ++L +
Sbjct: 150 VSDEEVEKAWKDACKSAGGAKAFKKTLKTYGYTEDTYKDSLKE 192
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 374,055,697
Number of Sequences: 1657284
Number of extensions: 5659469
Number of successful extensions: 16220
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16216
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33037407449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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