Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22b11
         (526 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    24   0.94 
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   5.0  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 230 NQCALNDSRWRDTNN 274
           N C LN  +WR  NN
Sbjct: 95  NSCILNQDKWRLLNN 109


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 18/56 (32%), Positives = 22/56 (39%)
 Frame = -2

Query: 339 LKLTLYICLLFIFTPSLIS*CQLFVSRHRLSFKAH*LSASLYCCNVRLYVFSSFLI 172
           LK   Y+    +    LIS C    S H  S K   L  S+   +    V  SFLI
Sbjct: 192 LKTAYYLISFALLIMRLISVCLCGASVHSESSKVLPLLFSVSSSSYNCEVLFSFLI 247


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,809
Number of Sequences: 336
Number of extensions: 1685
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12678017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)