Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22b11
(526 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003389-1|AAC71138.2| 865|Caenorhabditis elegans Hypothetical ... 31 0.38
AF149288-1|AAF99087.1| 644|Caenorhabditis elegans KRP85 protein. 28 3.6
AC024801-1|AAK68513.1| 646|Caenorhabditis elegans Kinesin-like ... 28 3.6
Z81509-7|CAJ85751.1| 544|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical p... 27 6.2
Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical p... 27 6.2
Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical p... 27 6.2
AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protei... 27 6.2
AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protei... 27 6.2
AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protei... 27 6.2
AC084159-21|AAK39355.2| 95|Caenorhabditis elegans Hypothetical... 27 6.2
Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical p... 27 8.2
U64849-1|AAC48052.3| 936|Caenorhabditis elegans Daf-12, redunda... 27 8.2
U23517-11|AAY44017.1| 288|Caenorhabditis elegans Hypothetical p... 27 8.2
AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen prot... 27 8.2
>AF003389-1|AAC71138.2| 865|Caenorhabditis elegans Hypothetical
protein F23H11.2 protein.
Length = 865
Score = 31.5 bits (68), Expect = 0.38
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +2
Query: 167 KAIKNELKTYNLTLQQYNEALNQCALNDSRWRDTNNWHHDIKEGVKINKRH 319
K I L T LT Q N QCAL D ++ D ++W H ++ +K + H
Sbjct: 481 KLIAYLLLTLRLTFQLDNA---QCALQDDQYFDVDSWIHQLEMRIKCWQGH 528
>AF149288-1|AAF99087.1| 644|Caenorhabditis elegans KRP85 protein.
Length = 644
Score = 28.3 bits (60), Expect = 3.6
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = +2
Query: 80 LQPQSKVKIIAHKTLEKFKRDAYTRFKGVKAIKNELKTYNLTLQQYNE 223
L+ ++ VK+ + + +A+ + K +K + NELK L+ E
Sbjct: 478 LEERTAVKVEIEERYSSLQEEAFVKSKKIKKVSNELKDARAELKDLEE 525
>AC024801-1|AAK68513.1| 646|Caenorhabditis elegans Kinesin-like
protein protein 20 protein.
Length = 646
Score = 28.3 bits (60), Expect = 3.6
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = +2
Query: 80 LQPQSKVKIIAHKTLEKFKRDAYTRFKGVKAIKNELKTYNLTLQQYNE 223
L+ ++ VK+ + + +A+ + K +K + NELK L+ E
Sbjct: 480 LEERTAVKVEIEERYSSLQEEAFVKSKKIKKVSNELKDARAELKDLEE 527
>Z81509-7|CAJ85751.1| 544|Caenorhabditis elegans Hypothetical
protein F21A3.2b protein.
Length = 544
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -2
Query: 342 ELKLTLYICLLFIFTPSLIS*CQLFVSRHRLSFK 241
E+ L C+LF+F ++S LFVSR FK
Sbjct: 5 EINQFLIYCILFLFMMLIVSIILLFVSRPIYKFK 38
>Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical protein
C36B1.1d protein.
Length = 1175
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 242 LNDSRWRDTNNWHHDIKEGVK 304
LNDSRW D WH G++
Sbjct: 1086 LNDSRWPDKRVWHGSKDGGIR 1106
>Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 242 LNDSRWRDTNNWHHDIKEGVK 304
LNDSRW D WH G++
Sbjct: 689 LNDSRWPDKRVWHGSKDGGIR 709
>Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical protein
C36B1.1a protein.
Length = 1138
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 242 LNDSRWRDTNNWHHDIKEGVK 304
LNDSRW D WH G++
Sbjct: 1049 LNDSRWPDKRVWHGSKDGGIR 1069
>Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical
protein C36B1.1c protein.
Length = 650
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 242 LNDSRWRDTNNWHHDIKEGVK 304
LNDSRW D WH G++
Sbjct: 561 LNDSRWPDKRVWHGSKDGGIR 581
>Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 242 LNDSRWRDTNNWHHDIKEGVK 304
LNDSRW D WH G++
Sbjct: 1086 LNDSRWPDKRVWHGSKDGGIR 1106
>Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 242 LNDSRWRDTNNWHHDIKEGVK 304
LNDSRW D WH G++
Sbjct: 689 LNDSRWPDKRVWHGSKDGGIR 709
>Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 242 LNDSRWRDTNNWHHDIKEGVK 304
LNDSRW D WH G++
Sbjct: 1049 LNDSRWPDKRVWHGSKDGGIR 1069
>AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protein
protein.
Length = 650
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 242 LNDSRWRDTNNWHHDIKEGVK 304
LNDSRW D WH G++
Sbjct: 561 LNDSRWPDKRVWHGSKDGGIR 581
>AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protein
protein.
Length = 778
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 242 LNDSRWRDTNNWHHDIKEGVK 304
LNDSRW D WH G++
Sbjct: 689 LNDSRWPDKRVWHGSKDGGIR 709
>AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protein
protein.
Length = 1117
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 242 LNDSRWRDTNNWHHDIKEGVK 304
LNDSRW D WH G++
Sbjct: 1028 LNDSRWPDKRVWHGSKDGGIR 1048
>AC084159-21|AAK39355.2| 95|Caenorhabditis elegans Hypothetical
protein Y73B3A.10 protein.
Length = 95
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2
Query: 170 AIKNELKTYNLTLQQYNEALNQCALNDSRWRDTNN--WHHDIKEGVKINKRHIYRVNFNS 343
AI+ +K L L++ E ++ + +RW T+ W H + VK+ + H R NF +
Sbjct: 20 AIETLVKLKLLKLRRSRE-MSLLKVRRNRWTRTSEEGWKHKVASNVKMIENHRLRHNFQT 78
>Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical
protein T11G6.5 protein.
Length = 1406
Score = 27.1 bits (57), Expect = 8.2
Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = +2
Query: 173 IKNELKTYNLTLQQYNEALNQCALN-DSRWRDTNNWHHDIKEGVKINKRHIYRVNFNS 343
I +++ T +Q NE + D W H + VK+ + H R NF +
Sbjct: 33 ISGKIEIVEATTEQRNELAESAKKSMDKNMASEEGWKHMVASNVKMIENHRLRHNFQT 90
>Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical
protein T11G6.5 protein.
Length = 1406
Score = 27.1 bits (57), Expect = 8.2
Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = +2
Query: 173 IKNELKTYNLTLQQYNEALNQCALN-DSRWRDTNNWHHDIKEGVKINKRHIYRVNFNS 343
I +++ T +Q NE + D W H + VK+ + H R NF +
Sbjct: 33 ISGKIEIVEATTEQRNELAESAKKSMDKNMASEEGWKHMVASNVKMIENHRLRHNFQT 90
>U64849-1|AAC48052.3| 936|Caenorhabditis elegans Daf-12, redundant
with protein 1 protein.
Length = 936
Score = 27.1 bits (57), Expect = 8.2
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Frame = +2
Query: 251 SRWRDTNNW---HHDIKEGVKINKRHIYRVNFNS 343
SRWRD N W H + GV + K RVN S
Sbjct: 230 SRWRDGNPWKESHRQLHHGVHVMKEP--RVNLRS 261
>U23517-11|AAY44017.1| 288|Caenorhabditis elegans Hypothetical
protein D1022.9 protein.
Length = 288
Score = 27.1 bits (57), Expect = 8.2
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -2
Query: 300 TPSLIS*CQLFVSRHRLSFKAH*LSASLYCCNVRLYVFSS 181
TP+ I+ ++F+++H+LS K + + Y N+R V S
Sbjct: 78 TPAAIADAEMFINQHKLSVKIDKATNNNYEDNLRCLVLMS 117
>AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen protein
101 protein.
Length = 314
Score = 27.1 bits (57), Expect = 8.2
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +2
Query: 89 QSKVKIIAHKTLEKFKRDAYTRFKGVKAIKNELKTYNLTLQQYNEALNQCALNDS 253
QS+V+ AH++ + D Y RF+GV ++ +K N+ ++Y+ + + DS
Sbjct: 53 QSEVEFCAHRSNGLW--DEYKRFEGVAGVEGRIKR-NVYERKYHAKQRRQSYGDS 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,056,414
Number of Sequences: 27780
Number of extensions: 144895
Number of successful extensions: 419
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 419
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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