Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22b03
(803 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical pr... 206 1e-53
AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl prot... 172 3e-43
U41746-2|AAO25989.1| 635|Caenorhabditis elegans Aspartyl protea... 95 2e-32
U41746-3|AAO25990.1| 429|Caenorhabditis elegans Aspartyl protea... 95 1e-31
Z82092-3|CAB05013.1| 638|Caenorhabditis elegans Hypothetical pr... 130 1e-30
AL021471-3|CAA16297.1| 638|Caenorhabditis elegans Hypothetical ... 130 1e-30
U34889-1|AAB06576.1| 388|Caenorhabditis elegans aspartic protea... 128 5e-30
AL132948-17|CAC51056.1| 396|Caenorhabditis elegans Hypothetical... 125 3e-29
AF210248-1|AAF19445.1| 396|Caenorhabditis elegans aspartic prot... 125 3e-29
AF208526-1|AAF19442.1| 396|Caenorhabditis elegans aspartic prot... 125 3e-29
AL132948-20|CAD31821.1| 391|Caenorhabditis elegans Hypothetical... 125 4e-29
U97000-5|AAC47991.1| 393|Caenorhabditis elegans Aspartyl protea... 124 7e-29
U97000-3|AAC47996.1| 389|Caenorhabditis elegans Aspartyl protea... 122 3e-28
AJ009861-1|CAA08899.1| 395|Caenorhabditis elegans aspartic prot... 121 7e-28
U97000-4|AAC47994.1| 395|Caenorhabditis elegans Hypothetical pr... 119 3e-27
AL132948-19|CAD31820.1| 395|Caenorhabditis elegans Hypothetical... 118 4e-27
AF045640-8|AAC02571.1| 394|Caenorhabditis elegans Hypothetical ... 113 2e-25
AL132948-18|CAD31819.1| 390|Caenorhabditis elegans Hypothetical... 111 6e-25
Z75527-3|CAA99777.1| 428|Caenorhabditis elegans Hypothetical pr... 66 1e-20
U64851-4|AAC47989.1| 389|Caenorhabditis elegans Hypothetical pr... 96 3e-20
AF016435-2|AAB65877.2| 380|Caenorhabditis elegans Hypothetical ... 92 4e-19
AF016435-1|AAB65878.1| 474|Caenorhabditis elegans Hypothetical ... 79 3e-15
U39852-5|AAK39258.1| 410|Caenorhabditis elegans Hypothetical pr... 62 5e-10
Z48178-4|CAA88202.1| 521|Caenorhabditis elegans Hypothetical pr... 30 2.2
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 29 2.9
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 3.9
Z81124-11|CAB03370.2| 306|Caenorhabditis elegans Hypothetical p... 28 6.8
Z81063-2|CAB02959.1| 823|Caenorhabditis elegans Hypothetical pr... 28 6.8
AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear recep... 28 9.0
AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear recep... 28 9.0
AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear recep... 28 9.0
AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormo... 28 9.0
AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormo... 28 9.0
AF025463-4|AAB71010.2| 344|Caenorhabditis elegans Serpentine re... 28 9.0
>Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical
protein R12H7.2 protein.
Length = 444
Score = 206 bits (503), Expect = 1e-53
Identities = 97/165 (58%), Positives = 124/165 (75%), Gaps = 1/165 (0%)
Frame = +2
Query: 272 DVTGPSPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHN 451
+V G E L NY+DAQY+G ISIGTP Q+F V+FDTGSSNLW+PSKKC + +IAC+LH+
Sbjct: 77 NVEGEIDELLRNYMDAQYFGTISIGTPAQNFTVIFDTGSSNLWIPSKKCPFYDIACMLHH 136
Query: 452 KYDSRKSTSYVANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVA 631
+YDS+ S++Y +G + AIQYG+GS+ GF+S D V V G+ Q FAEA SEPG+ FVA
Sbjct: 137 RYDSKSSSTYKEDGRKMAIQYGTGSMKGFISKDSVCVAGVCAEDQPFAEATSEPGITFVA 196
Query: 632 AKFDGILGMAFSTIAVDHVTPVFDNMVAQGLV-QPVFSFYLNRDP 763
AKFDGILGMA+ IAV V PVF+ + Q V +FSF+LNR+P
Sbjct: 197 AKFDGILGMAYPEIAVLGVQPVFNTLFEQKKVPSNLFSFWLNRNP 241
>AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl
protease protein 3 protein.
Length = 398
Score = 172 bits (418), Expect = 3e-43
Identities = 94/223 (42%), Positives = 134/223 (60%), Gaps = 12/223 (5%)
Frame = +2
Query: 143 LFFLALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP------EPLS 304
+F L + + A+ R+ L + R + + G+ E L+ KY V G P E LS
Sbjct: 5 VFLLLALVALASAIQRIKLEKRTYTREQY-KFGSIQEHLKAKY-VPGYIPNKDAFNEGLS 62
Query: 305 NYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSTSYV 484
+Y +AQYYG ++IGTPPQ+F+V+FDTGSSNLWVP C + +IAC +HN++D +KS+S
Sbjct: 63 DYSNAQYYGPVTIGTPPQNFQVLFDTGSSNLWVPCANCPFGDIACRMHNRFDCKKSSSCT 122
Query: 485 ANGTQFAIQYGSGSLSGFLSTDDVTVGG----LKVRRQTFAEAVSEPGLAFVAAKFDGIL 652
A G F IQYG+GS+ G + D V G + Q A A SEPG+ FVAAKFDGI
Sbjct: 123 ATGASFEIQYGTGSMKGTVDNDVVCFGHDTTYCTDKNQGLACATSEPGITFVAAKFDGIF 182
Query: 653 GMAFSTIAVDHVTPVFDNMVAQGLV--QPVFSFYLNRDPGATT 775
GM + TI+V+ ++ D + A + +F+F+L+RD T
Sbjct: 183 GMGWDTISVNKISQPMDQIFANSAICKNQLFAFWLSRDANDIT 225
>U41746-2|AAO25989.1| 635|Caenorhabditis elegans Aspartyl protease
protein 2, isoforma protein.
Length = 635
Score = 95.1 bits (226), Expect(2) = 2e-32
Identities = 52/120 (43%), Positives = 70/120 (58%), Gaps = 6/120 (5%)
Frame = +2
Query: 419 HYTNIACLLHNKYDSRKSTSYVANGTQFAIQYGSGSLSGFLSTDDVTVGG-----LKVRR 583
+YT+ +C NK+D+ KS+SY NG F I+YG+GS GFL D +T GG L V
Sbjct: 344 NYTD-SCFYQNKFDASKSSSYKTNGRNFIIEYGTGSARGFLGQDTITFGGIGEPQLAVPN 402
Query: 584 QTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPVFDNMVAQGLVQ-PVFSFYLNRD 760
F +A S F DGILG+AF +IAVD +TP F N + Q LV P+F+ +L +
Sbjct: 403 TVFGQATSLAAF-FEGQPLDGILGLAFKSIAVDQITPPFINAINQNLVDLPLFTVFLEHE 461
Score = 62.5 bits (145), Expect(2) = 2e-32
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 10/111 (9%)
Frame = +2
Query: 116 LKTTMGKISLFFL-ALIASSVMALYRVPLHRMKTARTHFHEVGT------ELELLRLKYD 274
+K G +LF L AL+A+++ A+ +VPL +++ R G + E+ R +
Sbjct: 201 IKIISGMQNLFLLLALVAAALAAVVQVPLVKIEPYRNRLIREGRWVQYRKDREIRRFMMN 260
Query: 275 VTGPSP---EPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 418
+ +++Y D Y G I+IGTP Q FKV+ DTGSSNLW+P C
Sbjct: 261 KQSNDMSVGQYVNDYEDEAYVGNITIGTPQQQFKVILDTGSSNLWIPDITC 311
Score = 54.8 bits (126), Expect = 7e-08
Identities = 35/104 (33%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Frame = +2
Query: 458 DSRKSTSYVANGTQF--AIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVA 631
D +S +Y A + A YGS S SG L D V+ GG+ + + V A
Sbjct: 21 DQLRSDAYAAGVDDYEHAGYYGSDSASGILGFDTVSFGGISESQLIVPDTV-----VATA 75
Query: 632 AKFDGILGMAFSTIAVDHVTPVFDNMVAQGLVQPVFSFYLNRDP 763
DGI+G+ F + ++ P F N V Q LV P+F YL P
Sbjct: 76 EDIDGIMGLGFLANSQQNIYPPFVNAVGQKLVDPIFHVYLGNRP 119
>U41746-3|AAO25990.1| 429|Caenorhabditis elegans Aspartyl protease
protein 2, isoformb protein.
Length = 429
Score = 95.1 bits (226), Expect(2) = 1e-31
Identities = 52/120 (43%), Positives = 70/120 (58%), Gaps = 6/120 (5%)
Frame = +2
Query: 419 HYTNIACLLHNKYDSRKSTSYVANGTQFAIQYGSGSLSGFLSTDDVTVGG-----LKVRR 583
+YT+ +C NK+D+ KS+SY NG F I+YG+GS GFL D +T GG L V
Sbjct: 138 NYTD-SCFYQNKFDASKSSSYKTNGRNFIIEYGTGSARGFLGQDTITFGGIGEPQLAVPN 196
Query: 584 QTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPVFDNMVAQGLVQ-PVFSFYLNRD 760
F +A S F DGILG+AF +IAVD +TP F N + Q LV P+F+ +L +
Sbjct: 197 TVFGQATSLAAF-FEGQPLDGILGLAFKSIAVDQITPPFINAINQNLVDLPLFTVFLEHE 255
Score = 60.1 bits (139), Expect(2) = 1e-31
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
Frame = +2
Query: 152 LALIASSVMALYRVPLHRMKTARTHFHEVGT------ELELLRLKYDVTGPSP---EPLS 304
LAL+A+++ A+ +VPL +++ R G + E+ R + + ++
Sbjct: 8 LALVAAALAAVVQVPLVKIEPYRNRLIREGRWVQYRKDREIRRFMMNKQSNDMSVGQYVN 67
Query: 305 NYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 418
+Y D Y G I+IGTP Q FKV+ DTGSSNLW+P C
Sbjct: 68 DYEDEAYVGNITIGTPQQQFKVILDTGSSNLWIPDITC 105
>Z82092-3|CAB05013.1| 638|Caenorhabditis elegans Hypothetical
protein ZK384.3 protein.
Length = 638
Score = 130 bits (314), Expect = 1e-30
Identities = 76/210 (36%), Positives = 113/210 (53%), Gaps = 6/210 (2%)
Frame = +2
Query: 152 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSPEPLSNYLDAQYYG 331
L L+ + A+++VP + R G L + +PL + D G
Sbjct: 5 LLLVTTCSAAVFQVPTTTSGSFRAKLIREGKYSSFLASRLQQLNTGSQPLLGFSDDPCIG 64
Query: 332 VISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTN----IACLLHNKYDSRKSTSYVANGTQ 499
I+IG+PPQS V DT S+NLWV C N + ++ +K+++ KSTS+V + +
Sbjct: 65 NITIGSPPQSAFVFMDTTSANLWVMGSACTSVNCNDPLLGIIKHKFNTTKSTSFVKSNRK 124
Query: 500 FAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAV 679
F IQYGSG SG+L TD V +GGLK+++Q F A + F DGI G+A+ ++V
Sbjct: 125 FNIQYGSGECSGYLGTDTVEIGGLKIQKQEFGVA-NIVDYDFGTRPIDGIFGLAWPALSV 183
Query: 680 DHVTPVFDNMVAQG-LVQPVFS-FYLNRDP 763
D VTP N+V+Q L P+F+ F+ RDP
Sbjct: 184 DQVTPPMQNLVSQNQLDAPIFTIFFDKRDP 213
Score = 94.3 bits (224), Expect = 9e-20
Identities = 57/156 (36%), Positives = 87/156 (55%), Gaps = 5/156 (3%)
Frame = +2
Query: 314 DAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTN---IACLLHNKYDSRKSTSYV 484
D G I+IGTPPQS V DT S+N WV KC N + + +K+++ KSTS+V
Sbjct: 451 DDSCIGNITIGTPPQSASVFMDTTSANWWVIGSKCTSANCNGYSGIRKHKFNTTKSTSFV 510
Query: 485 ANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAF 664
F+ +Y G +G+L TD V +GGL + +Q A + GL F + GI +A+
Sbjct: 511 EGNRTFSTEY--GLCTGYLGTDTVQMGGLTITKQELGIA-TIVGLGFGLKPYVGIFELAW 567
Query: 665 STIAVDHVTPVFDNMVAQG-LVQPVFSFYLN-RDPG 766
++VD VTP +++Q L P+F+ +L+ +D G
Sbjct: 568 PALSVDQVTPPMQKLISQNQLDAPMFTIWLDQKDQG 603
>AL021471-3|CAA16297.1| 638|Caenorhabditis elegans Hypothetical
protein ZK384.3 protein.
Length = 638
Score = 130 bits (314), Expect = 1e-30
Identities = 76/210 (36%), Positives = 113/210 (53%), Gaps = 6/210 (2%)
Frame = +2
Query: 152 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSPEPLSNYLDAQYYG 331
L L+ + A+++VP + R G L + +PL + D G
Sbjct: 5 LLLVTTCSAAVFQVPTTTSGSFRAKLIREGKYSSFLASRLQQLNTGSQPLLGFSDDPCIG 64
Query: 332 VISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTN----IACLLHNKYDSRKSTSYVANGTQ 499
I+IG+PPQS V DT S+NLWV C N + ++ +K+++ KSTS+V + +
Sbjct: 65 NITIGSPPQSAFVFMDTTSANLWVMGSACTSVNCNDPLLGIIKHKFNTTKSTSFVKSNRK 124
Query: 500 FAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAV 679
F IQYGSG SG+L TD V +GGLK+++Q F A + F DGI G+A+ ++V
Sbjct: 125 FNIQYGSGECSGYLGTDTVEIGGLKIQKQEFGVA-NIVDYDFGTRPIDGIFGLAWPALSV 183
Query: 680 DHVTPVFDNMVAQG-LVQPVFS-FYLNRDP 763
D VTP N+V+Q L P+F+ F+ RDP
Sbjct: 184 DQVTPPMQNLVSQNQLDAPIFTIFFDKRDP 213
Score = 94.3 bits (224), Expect = 9e-20
Identities = 57/156 (36%), Positives = 87/156 (55%), Gaps = 5/156 (3%)
Frame = +2
Query: 314 DAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTN---IACLLHNKYDSRKSTSYV 484
D G I+IGTPPQS V DT S+N WV KC N + + +K+++ KSTS+V
Sbjct: 451 DDSCIGNITIGTPPQSASVFMDTTSANWWVIGSKCTSANCNGYSGIRKHKFNTTKSTSFV 510
Query: 485 ANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAF 664
F+ +Y G +G+L TD V +GGL + +Q A + GL F + GI +A+
Sbjct: 511 EGNRTFSTEY--GLCTGYLGTDTVQMGGLTITKQELGIA-TIVGLGFGLKPYVGIFELAW 567
Query: 665 STIAVDHVTPVFDNMVAQG-LVQPVFSFYLN-RDPG 766
++VD VTP +++Q L P+F+ +L+ +D G
Sbjct: 568 PALSVDQVTPPMQKLISQNQLDAPMFTIWLDQKDQG 603
>U34889-1|AAB06576.1| 388|Caenorhabditis elegans aspartic protease
protein.
Length = 388
Score = 128 bits (309), Expect = 5e-30
Identities = 81/216 (37%), Positives = 114/216 (52%), Gaps = 10/216 (4%)
Frame = +2
Query: 152 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYLDA 319
LAL+A+ A+ +VP H+ ++ R + G L ++ +P +Y D
Sbjct: 7 LALVAACSAAVIQVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYFDD 66
Query: 320 QYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSTSYVANGTQ 499
Y G I++GTPPQ VV DTGSSNLWVP C + +C +Y S KS+++ ANG
Sbjct: 67 FYLGNITLGTPPQPATVVLDTGSSNLWVPGPSC---DGSCKGKREYQSTKSSTFKANGKP 123
Query: 500 FAIQYGSGSLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEPGLAFVAAKFDGILGMAF 664
+ IQYGSG+ G+L D V G L V TF A + F GILG+AF
Sbjct: 124 WQIQYGSGNAKGYLGEDTVAFGAVTEKQLPVPSTTFGIA-THISSDFKNDAAGGILGLAF 182
Query: 665 STIAVDHVTPVFDNMVAQGLV-QPVFSFYLNRDPGA 769
+++AVDHV P N + QGL+ QP+F+ +L A
Sbjct: 183 TSLAVDHVVPPLINAINQGLLDQPLFTVWLEHKGSA 218
>AL132948-17|CAC51056.1| 396|Caenorhabditis elegans Hypothetical
protein Y39B6A.20 protein.
Length = 396
Score = 125 bits (302), Expect = 3e-29
Identities = 76/213 (35%), Positives = 116/213 (54%), Gaps = 10/213 (4%)
Frame = +2
Query: 152 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYLDA 319
LAL+A+ A+ +VP H+ ++ R + G L ++ +P +Y D
Sbjct: 7 LALVAACSAAVIQVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYFDD 66
Query: 320 QYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKYDSRKSTSYV 484
Y G I++GTPPQ VV DTGSSNLWV ++ C+ + K+D+ KST++V
Sbjct: 67 FYLGNITLGTPPQPATVVLDTGSSNLWVIDAACKTQACNGYPDSGYTKQKFDTTKSTTFV 126
Query: 485 ANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAF 664
+F+IQYGSGS +G+L D + GGL V+ Q F + + F DGILG+ +
Sbjct: 127 KETRKFSIQYGSGSCNGYLGKDVLNFGGLTVQSQEFGVSTHLADV-FGYQPVDGILGLGW 185
Query: 665 STIAVDHVTPVFDNMVAQ-GLVQPVFSFYLNRD 760
+AVD V P N++AQ L P+F+ +L+R+
Sbjct: 186 PALAVDQVVPPMQNLIAQKQLDAPLFTVWLDRN 218
>AF210248-1|AAF19445.1| 396|Caenorhabditis elegans aspartic
protease 1 protein.
Length = 396
Score = 125 bits (302), Expect = 3e-29
Identities = 76/213 (35%), Positives = 116/213 (54%), Gaps = 10/213 (4%)
Frame = +2
Query: 152 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYLDA 319
LAL+A+ A+ +VP H+ ++ R + G L ++ +P +Y D
Sbjct: 7 LALVAACSAAVIQVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYFDD 66
Query: 320 QYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKYDSRKSTSYV 484
Y G I++GTPPQ VV DTGSSNLWV ++ C+ + K+D+ KST++V
Sbjct: 67 FYLGNITLGTPPQPATVVLDTGSSNLWVIDAACKTQACNGYPDSGYTKQKFDTTKSTTFV 126
Query: 485 ANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAF 664
+F+IQYGSGS +G+L D + GGL V+ Q F + + F DGILG+ +
Sbjct: 127 KETRKFSIQYGSGSCNGYLGKDVLNFGGLTVQSQEFGVSTHLADV-FGYQPVDGILGLGW 185
Query: 665 STIAVDHVTPVFDNMVAQ-GLVQPVFSFYLNRD 760
+AVD V P N++AQ L P+F+ +L+R+
Sbjct: 186 PALAVDQVVPPMQNLIAQKQLDAPLFTVWLDRN 218
>AF208526-1|AAF19442.1| 396|Caenorhabditis elegans aspartic
protease 1 protein.
Length = 396
Score = 125 bits (302), Expect = 3e-29
Identities = 76/213 (35%), Positives = 116/213 (54%), Gaps = 10/213 (4%)
Frame = +2
Query: 152 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYLDA 319
LAL+A+ A+ +VP H+ ++ R + G L ++ +P +Y D
Sbjct: 7 LALVAACSAAVIQVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYFDD 66
Query: 320 QYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKYDSRKSTSYV 484
Y G I++GTPPQ VV DTGSSNLWV ++ C+ + K+D+ KST++V
Sbjct: 67 FYLGNITLGTPPQPATVVLDTGSSNLWVIDAACKTQACNGYPDSGYTKQKFDTTKSTTFV 126
Query: 485 ANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAF 664
+F+IQYGSGS +G+L D + GGL V+ Q F + + F DGILG+ +
Sbjct: 127 KETRKFSIQYGSGSCNGYLGKDVLNFGGLTVQSQEFGVSTHLADV-FGYQPVDGILGLGW 185
Query: 665 STIAVDHVTPVFDNMVAQ-GLVQPVFSFYLNRD 760
+AVD V P N++AQ L P+F+ +L+R+
Sbjct: 186 PALAVDQVVPPMQNLIAQKQLDAPLFTVWLDRN 218
>AL132948-20|CAD31821.1| 391|Caenorhabditis elegans Hypothetical
protein Y39B6A.24 protein.
Length = 391
Score = 125 bits (301), Expect = 4e-29
Identities = 78/219 (35%), Positives = 117/219 (53%), Gaps = 9/219 (4%)
Frame = +2
Query: 128 MGKISLFFLALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVT-GPSPEPLS 304
M I L FLA S+ A++++P + R G E L ++ +P+S
Sbjct: 1 MHLIFLLFLAPFCSA--AVFQLPTKSTGSLRAKLIRAGKYQEFLITQHAARLNTISQPIS 58
Query: 305 NYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIAC-------LLHNKYDS 463
+Y D Y G ++GTPPQ +V DTGS+N+WV C N+ C K+D+
Sbjct: 59 DYSDEVYLGNFTVGTPPQPVSLVLDTGSANMWVIDASCD--NMFCNGWIGSNYTRQKFDT 116
Query: 464 RKSTSYVANGTQFAIQYGSGSLSGFLSTDDVTV-GGLKVRRQTFAEAVSEPGLAFVAAKF 640
KS+S+ +F+IQYG G SG+L TD V + GGL +R+Q A ++ + F
Sbjct: 117 SKSSSFSRENRKFSIQYGKGLCSGYLGTDTVGLGGGLTIRKQELGIA-NKLDVDFAVQPM 175
Query: 641 DGILGMAFSTIAVDHVTPVFDNMVAQGLVQPVFSFYLNR 757
DGI G+A+ +AVD +TP N+++Q L PVFS +L+R
Sbjct: 176 DGIFGLAWPALAVDQITPPMQNLISQ-LDVPVFSVWLDR 213
>U97000-5|AAC47991.1| 393|Caenorhabditis elegans Aspartyl protease
protein 5 protein.
Length = 393
Score = 124 bits (299), Expect = 7e-29
Identities = 71/167 (42%), Positives = 99/167 (59%), Gaps = 6/167 (3%)
Frame = +2
Query: 287 SPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSR 466
+P+ ++++ D +Y G I+IGTPPQ F VV DTGSSNLWVP C + +C +Y S
Sbjct: 61 APQNVNDFGDFEYLGNITIGTPPQPFLVVLDTGSSNLWVPGPSC---DGSCKGKREYQST 117
Query: 467 KSTSYVANGTQFAIQYGSGSLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEPGLAFVA 631
KS+++ ANG + IQYGSG+ G+L D V G L V TF A + F
Sbjct: 118 KSSTFKANGKPWQIQYGSGNAKGYLGEDTVAFGAVTEKQLPVPSTTFGIA-THISSDFKN 176
Query: 632 AKFDGILGMAFSTIAVDHVTPVFDNMVAQGLV-QPVFSFYLNRDPGA 769
+GILG+AF+++AVDHV P N + QGL+ QP+F+ +L A
Sbjct: 177 DAAEGILGLAFTSLAVDHVVPPLINAINQGLLDQPLFTVWLEHKGSA 223
>U97000-3|AAC47996.1| 389|Caenorhabditis elegans Aspartyl protease
protein 6 protein.
Length = 389
Score = 122 bits (294), Expect = 3e-28
Identities = 71/160 (44%), Positives = 96/160 (60%), Gaps = 6/160 (3%)
Frame = +2
Query: 290 PEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRK 469
P+ ++++ D +Y G I+IGTP Q F VV DTGSSNLW+P C TN C +K+DS
Sbjct: 60 PQNVNDFGDFEYLGNITIGTPDQGFIVVLDTGSSNLWIPGPTCK-TN--CKTKSKFDSTA 116
Query: 470 STSYVANGTQFAIQYGSGSLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEPGLAFVAA 634
S+++V NG + IQYGSG +G L D V G L V TF A S+ F
Sbjct: 117 SSTFVKNGKSWTIQYGSGDAAGILGQDTVRFGAKGDSQLSVPTTTFGIA-SKISADFKND 175
Query: 635 KFDGILGMAFSTIAVDHVTPVFDNMVAQGLV-QPVFSFYL 751
DGILG+AF+++AVD V P N + QG++ QP+FS +L
Sbjct: 176 ATDGILGLAFTSLAVDGVVPPLINAINQGILDQPLFSVWL 215
>AJ009861-1|CAA08899.1| 395|Caenorhabditis elegans aspartic
protease protein.
Length = 395
Score = 121 bits (291), Expect = 7e-28
Identities = 74/215 (34%), Positives = 116/215 (53%), Gaps = 10/215 (4%)
Frame = +2
Query: 146 FFLALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYL 313
F L+ + + A+ +VP H+ ++ R + G L ++ +P +Y
Sbjct: 4 FVLSPLWACSAAVIQVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYF 63
Query: 314 DAQYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKYDSRKSTS 478
D Y G I++GTPPQ VV DTGSSNLWV ++ C+ + K+D+ KST+
Sbjct: 64 DDFYLGNITLGTPPQPATVVLDTGSSNLWVIDAACKTQACNGYPDSGYTKQKFDTTKSTT 123
Query: 479 YVANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGM 658
+V +F+IQYGSGS +G+L D + GGL V+ Q F + + F DGILG+
Sbjct: 124 FVKETRKFSIQYGSGSCNGYLGKDVLNFGGLTVQSQEFGVSTHLADV-FGYQPVDGILGL 182
Query: 659 AFSTIAVDHVTPVFDNMVAQ-GLVQPVFSFYLNRD 760
++ +AVD V P N++AQ L P+F+ +L+R+
Sbjct: 183 GWTALAVDQVVPPMQNLIAQKQLDAPLFTVWLDRN 217
>U97000-4|AAC47994.1| 395|Caenorhabditis elegans Hypothetical
protein F21F8.4 protein.
Length = 395
Score = 119 bits (286), Expect = 3e-27
Identities = 69/165 (41%), Positives = 97/165 (58%), Gaps = 6/165 (3%)
Frame = +2
Query: 275 VTGPSPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNK 454
V +P+ ++++ D +Y G I+IGTPPQ F VV DTGS+NLWVP C T C ++
Sbjct: 57 VFASAPQNVNDFGDVEYLGNITIGTPPQQFIVVLDTGSANLWVPGSNCDGT---CKGKSE 113
Query: 455 YDSRKSTSYVANGTQFAIQYGSGSLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEPGL 619
+DS KST++ NG + IQY SGS G + D V GG L V TF A S
Sbjct: 114 FDSSKSTTFKKNGQSWQIQYESGSAKGIMGVDTVAFGGASEQQLLVPSTTFGIA-SHISS 172
Query: 620 AFVAAKFDGILGMAFSTIAVDHVTPVFDNMVAQGLV-QPVFSFYL 751
F +GILG+AF+++AVD VTP N + + ++ QP+F+ +L
Sbjct: 173 NFKNDAAEGILGLAFTSLAVDGVTPPLINAINKKILDQPLFTVFL 217
>AL132948-19|CAD31820.1| 395|Caenorhabditis elegans Hypothetical
protein Y39B6A.23 protein.
Length = 395
Score = 118 bits (285), Expect = 4e-27
Identities = 72/215 (33%), Positives = 113/215 (52%), Gaps = 10/215 (4%)
Frame = +2
Query: 143 LFFLALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVT----GPSPEPLSNY 310
+F L L+ A+ ++P + R + G E L ++ +PL +Y
Sbjct: 4 VFLLFLVPFCSAAVLQLPTKSTGSLRAKLIQAGKYQEFLASQHAARLQQLNTGSQPLIDY 63
Query: 311 LDAQYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKYDSRKST 475
D Y I++GTPPQ VV DT S+NLWV S+ C+ + K++ KS+
Sbjct: 64 YDDMYLANITVGTPPQPASVVLDTASANLWVIDAACNSQACNGNPGSGYTKQKFNPNKSS 123
Query: 476 SYVANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILG 655
++V +F+IQYGSG+ SG+L TD + +GGL V+ Q F A + G + DGI G
Sbjct: 124 TFVKGTRRFSIQYGSGTSSGYLGTDVLQLGGLTVKAQEFGVA-TNLGSVLGSEPMDGIFG 182
Query: 656 MAFSTIAVDHVTPVFDNMVAQ-GLVQPVFSFYLNR 757
+ + I+VD VTP N+++Q L P+FS +++R
Sbjct: 183 LGWPAISVDQVTPPMQNLISQKQLDAPLFSIWVDR 217
>AF045640-8|AAC02571.1| 394|Caenorhabditis elegans Hypothetical
protein C11D2.2 protein.
Length = 394
Score = 113 bits (271), Expect = 2e-25
Identities = 66/172 (38%), Positives = 96/172 (55%), Gaps = 10/172 (5%)
Frame = +2
Query: 266 KYDVTGPSPEPLSNYLDAQYYGVISIGTP-----PQSFKVVFDTGSSNLWVPSKKCHYTN 430
K+ + + ++++ D Y+G I++GTP Q+F VV DTGSSN+WVP C +
Sbjct: 47 KHTIHKGQHQHVADFRDFAYFGNITLGTPIESTAEQTFLVVLDTGSSNVWVPDNSCGIDD 106
Query: 431 --IACLLHNKYDSRKSTSYVANGTQFAIQYGSGSLSGFLSTDDVTVGG--LKVRRQTFAE 598
AC KY S+SY +GT F+I YG+GS SG+ D + L ++ Q F +
Sbjct: 107 KKSACTYKKKYFGTDSSSYEKDGTPFSISYGTGSASGYFGKDTLCFSDTTLCIKSQIFGQ 166
Query: 599 AVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPVFDNMVAQGLV-QPVFSFYL 751
A + F + DGILG+ F+ +AV V P F N V QGLV +P+F+ YL
Sbjct: 167 A-NNIAPFFANQEIDGILGLGFTDLAVHSVPPPFVNAVEQGLVDEPIFTVYL 217
>AL132948-18|CAD31819.1| 390|Caenorhabditis elegans Hypothetical
protein Y39B6A.22 protein.
Length = 390
Score = 111 bits (267), Expect = 6e-25
Identities = 76/218 (34%), Positives = 115/218 (52%), Gaps = 8/218 (3%)
Frame = +2
Query: 128 MGKISLFFLALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKY-DVTGPSPEPLS 304
M I L F+A S+ A+ ++P + R + G E L ++ PL+
Sbjct: 1 MHLIFLLFIATFCSA--AVLQLPTKSTGSLRAKLIQSGKYPEFLASQHVSRLNSGALPLA 58
Query: 305 NYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIAC-----LLHN--KYDS 463
+Y+D Y I++GTPPQS VV TGS+N WV C T+ AC H K+ S
Sbjct: 59 DYMDEIYTANITVGTPPQSASVVMGTGSANFWVVGAGC--TSPACNGFPDSGHTKLKFYS 116
Query: 464 RKSTSYVANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFD 643
KS+S+V +F I Y +G+ SG+L TD + +GGL V+ Q FA ++ D
Sbjct: 117 NKSSSFVDLNRKFFINYPTGACSGYLGTDVLQLGGLTVKNQEFA-VTTQISDQMGHFPLD 175
Query: 644 GILGMAFSTIAVDHVTPVFDNMVAQGLVQPVFSFYLNR 757
G+LG+A+ +AVD +TP N++ Q L P+F+ +L+R
Sbjct: 176 GVLGLAWPPVAVDQITPPMQNLMPQ-LDAPIFTLWLDR 212
>Z75527-3|CAA99777.1| 428|Caenorhabditis elegans Hypothetical
protein C15C8.3 protein.
Length = 428
Score = 66.1 bits (154), Expect(2) = 1e-20
Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Frame = +2
Query: 425 TNIACLLHNKYDSRKSTSYVANGTQFAIQYGSGSLSGFLSTDDVTVGGLKV--RRQTFAE 598
T AC ++++S S+SYV NG +F + Y +G + GF D V Q F +
Sbjct: 144 TTDACQSKHRFNSSLSSSYVTNGQKFDMTYNTGEVKGFFGVDTFCFTNTSVCATGQVFGQ 203
Query: 599 AVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPVFDNMVAQG-LVQPVFSFYL 751
A + G AF DGI+G+ + +AV+ TP N++ QG L QP F YL
Sbjct: 204 ATT-IGEAFAKQPEDGIIGLGWPALAVNQQTPPLFNLMNQGKLDQPYFVVYL 254
Score = 51.6 bits (118), Expect(2) = 1e-20
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 185 YRVPLHRMKTARTHFHEVGTEL-ELLRLKYDVTGPSPEPLSNYLDAQYYGVISIGTPPQS 361
YR + + A+ E E ELL K S P+ +Y D Y IS+G+P Q+
Sbjct: 25 YRPNMRQRMNAKGKLAEYEKERNELLSKKSLQLASSSSPVIDYEDMAYMVQISLGSPAQN 84
Query: 362 FKVVFDTGSSNLWVPSKKC 418
F + D+GSSNLWVP C
Sbjct: 85 FVLFIDSGSSNLWVPDITC 103
>U64851-4|AAC47989.1| 389|Caenorhabditis elegans Hypothetical
protein F28A12.4 protein.
Length = 389
Score = 95.9 bits (228), Expect = 3e-20
Identities = 54/158 (34%), Positives = 88/158 (55%), Gaps = 6/158 (3%)
Frame = +2
Query: 302 SNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSTSY 481
++Y+ +Y G I++GTP Q+F VV DTGS+NL +P C C ++ + S++Y
Sbjct: 65 TDYVYYEYMGNITVGTPDQNFIVVLDTGSANLLIPGTNC---TTYCEKKRLFNEKASSTY 121
Query: 482 VANGTQFAIQYGSGSLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEPGLAFVAAKFDG 646
+A + I+Y SG G L D V +GG L + R ++ G F + +G
Sbjct: 122 IATNRPWQIKYASGDAYGTLGIDTVKIGGSGEAQLAIPR-SYLGVADTVGSDFKWSPKEG 180
Query: 647 ILGMAFSTIAVDHVTPVFDNMVAQGLV-QPVFSFYLNR 757
I G+AF+ +AVD++TP N + QGL+ QP+F+ + +
Sbjct: 181 IFGLAFTALAVDNITPPIINAINQGLLDQPLFTTWFGQ 218
>AF016435-2|AAB65877.2| 380|Caenorhabditis elegans Hypothetical
protein F59D6.2 protein.
Length = 380
Score = 92.3 bits (219), Expect = 4e-19
Identities = 59/202 (29%), Positives = 97/202 (48%)
Frame = +2
Query: 152 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSPEPLSNYLDAQYYG 331
LAL+ + + L + R G EL RL+ TG E + ++ D Y
Sbjct: 9 LALLVFCSAGQFSISLEKSVPLREQLIREGRELA--RLQQLSTGN--ESIYDHFDEYYTV 64
Query: 332 VISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSTSYVANGTQFAIQ 511
+ IGTP Q F+V DT SSNLWV +C + +Y+ S++++A + F +
Sbjct: 65 SVRIGTPAQHFEVALDTTSSNLWVFGVECKSQSCQGHRIREYNRTASSTFIAGTSNFVLP 124
Query: 512 YGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVT 691
+ G +SG L D++ G K++ Q F L+ V FDG+LG+ + A++ +
Sbjct: 125 FNDGDVSGDLGKDNIQFAGSKIQNQDFGIGTDATRLSGVT--FDGVLGLGWPATALNGTS 182
Query: 692 PVFDNMVAQGLVQPVFSFYLNR 757
N++ Q L QP+F+ Y +
Sbjct: 183 TTMQNLLPQ-LDQPLFTTYFTK 203
>AF016435-1|AAB65878.1| 474|Caenorhabditis elegans Hypothetical
protein F59D6.3 protein.
Length = 474
Score = 79.4 bits (187), Expect = 3e-15
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 4/213 (1%)
Frame = +2
Query: 131 GKISLFFLALIASSVMALYRVPLHRMKTARTHFHEVGTE-LELLRLKYDVTGPSPEPLSN 307
GK+ + L L+A + + + + + R G EL R++ TG +
Sbjct: 91 GKL-ISLLGLVALCSAGQFSISVEKSGSLREQLIREGRYGQELARIQQLSTGNVS--FFD 147
Query: 308 YLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNI---ACLLHNKYDSRKSTS 478
+ D Y + IGTP Q F+V FDT SSNLWV +C N +Y+ S++
Sbjct: 148 HFDEYYTAGVRIGTPAQHFQVAFDTTSSNLWVFGVECRSQNCHGGRGRRDREYNRTASST 207
Query: 479 YVANGTQFAIQYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGM 658
+VA + F + Y G +SG + D G ++ Q F + FDG+LG+
Sbjct: 208 FVAGTSSFNLPYDGGHVSGNVGKDTAQFAGFTIQSQDF--GIGTAATRLFGETFDGVLGL 265
Query: 659 AFSTIAVDHVTPVFDNMVAQGLVQPVFSFYLNR 757
+ A++ + N++ Q L Q +F+ Y +
Sbjct: 266 GWPATALNGTSTTMQNLLPQ-LDQKLFTTYFTK 297
>U39852-5|AAK39258.1| 410|Caenorhabditis elegans Hypothetical
protein K10C2.3 protein.
Length = 410
Score = 62.1 bits (144), Expect = 5e-10
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 5/116 (4%)
Frame = +2
Query: 335 ISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSTSYVANGTQFAIQY 514
+++GTP Q F VV DT ++++ +P C N C +++ KS+SY A G ++ +
Sbjct: 92 LTMGTPGQLFTVVIDTSTADIVIPDMSCKTAN-NCYNKRRFNQAKSSSYYAYGNKYTYKN 150
Query: 515 GSGSLSGFLSTDDVTVGGLKVRRQT-----FAEAVSEPGLAFVAAKFDGILGMAFS 667
G+ GF + D V +G K T F +A ++ GL DGILG+ F+
Sbjct: 151 NLGTFQGFDAKDTVVIGDRKTDLITIPGVKFMQA-TDLGLLMDGLGADGILGLGFT 205
>Z48178-4|CAA88202.1| 521|Caenorhabditis elegans Hypothetical
protein C05C10.3 protein.
Length = 521
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Frame = +2
Query: 344 GTPPQSFKVVFDTGSSNLWVPSKKCHYTN--IACLLHNKYDSRKSTSYVANGTQFAIQYG 517
G P + + TG L S N + LL + + +SYV +FA QY
Sbjct: 65 GIPENLIQAITKTGQKGLTCVSNNAGVDNWGLGLLLQTRQIKKMISSYVGENGEFARQYL 124
Query: 518 SGSL 529
SG L
Sbjct: 125 SGEL 128
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 3/59 (5%)
Frame = -2
Query: 727 HESLSHHVVEHRGHMVHCDSAEGHPEDPVELGGHEGKPGLRHG---LGERLAPHLEPAH 560
H HH H GH A H E G H G G H G H PAH
Sbjct: 457 HHGEHHHAPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAH 515
Score = 29.5 bits (63), Expect = 2.9
Identities = 23/64 (35%), Positives = 24/64 (37%), Gaps = 4/64 (6%)
Frame = -2
Query: 733 GLHESLSH--HVVEHRGHMVHCDSAEGHPEDPVELGGHEGKPGLRHGLGERLAPHLE--P 566
G HES H H H GH H + H G H G HG APH E
Sbjct: 588 GHHESHGHGHHAPAHHGH--HGEHGVHHGHHGAGYGAHHGH----HGAHHHHAPHHEHHE 641
Query: 565 AHGD 554
HGD
Sbjct: 642 HHGD 645
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/60 (31%), Positives = 22/60 (36%), Gaps = 4/60 (6%)
Frame = -2
Query: 727 HESLSHHVVEHRGHMVHCDSAEGHPED----PVELGGHEGKPGLRHGLGERLAPHLEPAH 560
H HH H GH + GH + P GH G+ G HG H PAH
Sbjct: 505 HHGEHHHAPAHHGHHGEHGTHHGHHGEHHHAPAH-HGHHGEHGTHHG---HHGSHHSPAH 560
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -1
Query: 407 KAPRGWRIRCRIPP*TTAAACRY*SLRSTEHQDNLTMVRVKG-QSHRILISTAP 249
KAP R ++PP T AAA R S+ +T +R G +S + ++T P
Sbjct: 717 KAPSTVTTRSKVPPPTAAAAVRIVSVTTTTTPTKTAELRKPGARSPKTTVATVP 770
>Z81124-11|CAB03370.2| 306|Caenorhabditis elegans Hypothetical
protein T21B4.1 protein.
Length = 306
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -3
Query: 507 IANWVPFATYDVDLRLSYLLCSKQ 436
+ NW F T + +++SYLLC+K+
Sbjct: 243 LQNWSNFGTTPLIIQISYLLCNKR 266
>Z81063-2|CAB02959.1| 823|Caenorhabditis elegans Hypothetical
protein F15D3.4 protein.
Length = 823
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +2
Query: 512 YGSGSLSGFLSTDDVTVGGLKVRRQTF 592
Y GSL GFL DDV L +RQ F
Sbjct: 53 YPDGSLEGFLDIDDVQKKKLDEQRQEF 79
>AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 618
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -3
Query: 654 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 523
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 2 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 43
>AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 624
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -3
Query: 654 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 523
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 4 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 45
>AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 619
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -3
Query: 654 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 523
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 1 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 42
>AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform d protein.
Length = 659
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -3
Query: 654 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 523
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 39 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 80
>AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform c protein.
Length = 733
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -3
Query: 654 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 523
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 113 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 154
>AF025463-4|AAB71010.2| 344|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 3 protein.
Length = 344
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/68 (29%), Positives = 29/68 (42%)
Frame = -1
Query: 446 AANKRCWCSGTFWKAPRGWRIRCRIPP*TTAAACRY*SLRSTEHQDNLTMVRVKGQSHRI 267
A N CW + TF A I C P R+ +L+S + + +TM SH+
Sbjct: 192 AGNMSCWSAATF-SAIVYMTIPC-FPIYGVIVFFRHKTLKSLDGRGRITMSETTRSSHKQ 249
Query: 266 LISTAPVQ 243
LI +Q
Sbjct: 250 LIKALTIQ 257
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,719,423
Number of Sequences: 27780
Number of extensions: 380288
Number of successful extensions: 1322
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1271
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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