Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22b02
         (738 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY128431-1|AAM75024.1|  667|Drosophila melanogaster GM10569p pro...    31   1.2  
AE013599-2212|AAF58047.1| 1448|Drosophila melanogaster CG8443-PA...    31   1.2  
BT011344-1|AAR96136.1| 1447|Drosophila melanogaster RH51925p pro...    30   2.9  
AY060753-1|AAL28301.1|  271|Drosophila melanogaster GH20409p pro...    30   2.9  
AE014296-2654|AAZ66062.1|  166|Drosophila melanogaster CG33687-P...    30   2.9  
AE014134-406|AAF51257.1|  271|Drosophila melanogaster CG3557-PA ...    30   2.9  
AE014298-1518|AAF47970.1|  453|Drosophila melanogaster CG1637-PA...    30   3.8  
BT025148-1|ABE73318.1|  270|Drosophila melanogaster IP04354p pro...    29   6.6  

>AY128431-1|AAM75024.1|  667|Drosophila melanogaster GM10569p
           protein.
          Length = 667

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 45/200 (22%), Positives = 76/200 (38%), Gaps = 7/200 (3%)
 Frame = +1

Query: 40  VGSMATKRKIGDSSSDDNQPKRERVESGEDQQLVPYNNNNGAAFNVKHDETGVMCYFTPS 219
           V S    +K G+     N+ K  +   G+ QQ    N N  ++ +            TP 
Sbjct: 178 VSSEEAHKKRGNGGKH-NKHKSSKGGKGQQQQQTTGNQNGSSSGSSNSSSASDWTLMTPR 236

Query: 220 SVQLEPRELTKMLWQEQM---AINVKRGNFSILNCSCFEGRFLKNEFCRLANLNSL---H 381
           S+  + R+  K+ W  ++   +I      + IL  S      L   FC    +  L   +
Sbjct: 237 SLWQQIRKEAKVYWDWELDCDSIETAVSKYGILRIS------LMRAFCLKVGIQVLLREY 290

Query: 382 EWEDKLYPE-PDKNIVVLEPANGKTTYTIGPRVQGKPCGFWFSDFGTIKRAKSNFGQFFS 558
            +E K  P   D +IV + P        I PR       + F   G  K  +  F + + 
Sbjct: 291 NFESKHKPTFGDDDIVNVFP----IVKHISPRATD---AYNFYTTGQAKIQQGLFKEGYE 343

Query: 559 IQYGDIHKHNNIFGNILQRH 618
           +  G ++  NN+FG + Q +
Sbjct: 344 LISGALNLLNNVFGALHQEN 363


>AE013599-2212|AAF58047.1| 1448|Drosophila melanogaster CG8443-PA
            protein.
          Length = 1448

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 45/200 (22%), Positives = 76/200 (38%), Gaps = 7/200 (3%)
 Frame = +1

Query: 40   VGSMATKRKIGDSSSDDNQPKRERVESGEDQQLVPYNNNNGAAFNVKHDETGVMCYFTPS 219
            V S    +K G+     N+ K  +   G+ QQ    N N  ++ +            TP 
Sbjct: 959  VSSEEAHKKRGNGGKH-NKHKSSKGGKGQQQQQTTGNQNGSSSGSSNSSSASDWTLMTPR 1017

Query: 220  SVQLEPRELTKMLWQEQM---AINVKRGNFSILNCSCFEGRFLKNEFCRLANLNSL---H 381
            S+  + R+  K+ W  ++   +I      + IL  S      L   FC    +  L   +
Sbjct: 1018 SLWQQIRKEAKVYWDWELDCDSIETAVSKYGILRIS------LMRAFCLKVGIQVLLREY 1071

Query: 382  EWEDKLYPE-PDKNIVVLEPANGKTTYTIGPRVQGKPCGFWFSDFGTIKRAKSNFGQFFS 558
             +E K  P   D +IV + P        I PR       + F   G  K  +  F + + 
Sbjct: 1072 NFESKHKPTFGDDDIVNVFP----IVKHISPRATD---AYNFYTTGQAKIQQGLFKEGYE 1124

Query: 559  IQYGDIHKHNNIFGNILQRH 618
            +  G ++  NN+FG + Q +
Sbjct: 1125 LISGALNLLNNVFGALHQEN 1144


>BT011344-1|AAR96136.1| 1447|Drosophila melanogaster RH51925p protein.
          Length = 1447

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 41/183 (22%), Positives = 70/183 (38%), Gaps = 7/183 (3%)
 Frame = +1

Query: 91   NQPKRERVESGEDQQLVPYNNNNGAAFNVKHDETGVMCYFTPSSVQLEPRELTKMLWQEQ 270
            N+ K  +   G+ QQ    N N  ++ +            TP S+  + R+  K+ W  +
Sbjct: 974  NKHKSSKGGKGQQQQQTTGNQNGSSSGSSNSSSASDWTLMTPRSLWQQIRKEAKVYWDWE 1033

Query: 271  M---AINVKRGNFSILNCSCFEGRFLKNEFCRLANLNSL---HEWEDKLYPE-PDKNIVV 429
            +   +I      + IL  S      L   FC    +  L   + +E K  P   D +IV 
Sbjct: 1034 LDCDSIETAVSKYGILRIS------LMRAFCLRVGIQVLLREYNFESKHKPTFGDDDIVN 1087

Query: 430  LEPANGKTTYTIGPRVQGKPCGFWFSDFGTIKRAKSNFGQFFSIQYGDIHKHNNIFGNIL 609
            + P        I PR       + F   G  K  +  F + + +  G ++  NN+FG + 
Sbjct: 1088 VFP----IVKHISPRATD---AYNFYTTGQAKIQQGLFKEGYELISGALNLLNNVFGALH 1140

Query: 610  QRH 618
            Q +
Sbjct: 1141 QEN 1143


>AY060753-1|AAL28301.1|  271|Drosophila melanogaster GH20409p
           protein.
          Length = 271

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = +2

Query: 377 CTNGKTSCIPSPIKISWCWSRPTARLRTPSVQECRASPADFGFPTLEP*NVPKAT 541
           C++G +S  PS    S C S+P+     P    C ASP     P   P + PK++
Sbjct: 85  CSSGSSSAYPSSSAWSTCCSKPSTICCYPKPTRCCASPKAPLVP-CSPMDTPKSS 138


>AE014296-2654|AAZ66062.1|  166|Drosophila melanogaster CG33687-PA
           protein.
          Length = 166

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = +1

Query: 295 NFSILNCSCFEGRFLKNEFCRLANLNSLHEWED---KLYPEPDKNIVV 429
           +F+ L C   +  F   E CR+  +N  H++ D   KLY  P  NI++
Sbjct: 13  SFTNLKCEMIDRTFGNFEMCRIKAVNRTHKYIDINLKLYILPINNIMI 60


>AE014134-406|AAF51257.1|  271|Drosophila melanogaster CG3557-PA
           protein.
          Length = 271

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = +2

Query: 377 CTNGKTSCIPSPIKISWCWSRPTARLRTPSVQECRASPADFGFPTLEP*NVPKAT 541
           C++G +S  PS    S C S+P+     P    C ASP     P   P + PK++
Sbjct: 85  CSSGSSSAYPSSSAWSTCCSKPSTICCYPKPTRCCASPKAPLVP-CSPMDTPKSS 138


>AE014298-1518|AAF47970.1|  453|Drosophila melanogaster CG1637-PA,
           isoform A protein.
          Length = 453

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 8/29 (27%), Positives = 19/29 (65%)
 Frame = +3

Query: 510 LWNHKTCQKQLWPVF*HSIRRHSQTQQYI 596
           LW H+ C +++WP++ +++   S  + Y+
Sbjct: 339 LWAHEHCYERMWPMYNYTVFNGSLAEPYV 367


>BT025148-1|ABE73318.1|  270|Drosophila melanogaster IP04354p
           protein.
          Length = 270

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -3

Query: 616 VFAKCCQIYCCVCECLRIEC*KTGQSCF 533
           +++ CC  YCC C C    C      CF
Sbjct: 5   IYSCCCCCYCCCCTCCCCCCCSCCCRCF 32


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,416,088
Number of Sequences: 53049
Number of extensions: 820737
Number of successful extensions: 2904
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2898
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)