Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22a17
         (770 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1AE95 Cluster: Transmembrane protein 183B; n=26; Eutel...    70   6e-11
UniRef50_UPI0000D57529 Cluster: PREDICTED: similar to CG12765-PA...    67   5e-10
UniRef50_A7SQM0 Cluster: Predicted protein; n=1; Nematostella ve...    63   8e-09
UniRef50_Q4SRB0 Cluster: Chromosome 11 SCAF14528, whole genome s...    41   1e-06
UniRef50_UPI0000E47B29 Cluster: PREDICTED: hypothetical protein;...    45   0.002
UniRef50_O13936 Cluster: Transcription elongation factor spt5; n...    34   3.4  
UniRef50_A6DPE3 Cluster: Putative uncharacterized protein; n=1; ...    34   4.5  
UniRef50_Q16FN0 Cluster: Putative uncharacterized protein; n=1; ...    34   4.5  

>UniRef50_Q1AE95 Cluster: Transmembrane protein 183B; n=26;
           Euteleostomi|Rep: Transmembrane protein 183B - Homo
           sapiens (Human)
          Length = 376

 Score = 70.1 bits (164), Expect = 6e-11
 Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
 Frame = +1

Query: 61  IDANPDQDTQVLQVTCRNFHEVPPLMGMILSSVTMVHSHKAIHQRLYLDFNTGSYNVGKD 240
           +  NPDQD  +LQVT  NF  +P +MGMI +  T+  S    H R+ L F     + G+ 
Sbjct: 284 VHTNPDQDCCLLQVTTLNFIFIPIVMGMIFTLFTINVSTDMRHHRVRLVFQDSPVHGGRK 343

Query: 241 ILPE--CTVVLDTVLNMHVYDWWHPKYP 318
           +  E    V+LD V ++ ++DWWHP+YP
Sbjct: 344 LRSEQGVQVILDPVHSVRLFDWWHPQYP 371


>UniRef50_UPI0000D57529 Cluster: PREDICTED: similar to CG12765-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG12765-PA - Tribolium castaneum
          Length = 351

 Score = 66.9 bits (156), Expect = 5e-10
 Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
 Frame = +1

Query: 37  DFITELGRIDANPDQDTQVLQVTCRNFHEVPPLMGMILSSVTMVHSHKAIHQRLYLDFNT 216
           D +  L  + AN D+  ++LQVTC++   + P++G+ L+S  +  S +    +L L F +
Sbjct: 245 DLLEMLDDVFANQDESCRILQVTCKHLIPIAPVLGLTLTSAQLNLSSELRSYKLQLWFGS 304

Query: 217 GSYNVGKDILPECT-VVLDTVLNMHVYDWWHPKYPHFDNKTPTCTED 354
              +         T ++L+ V+N+ V DWWHP YPH  N    C ++
Sbjct: 305 EIQSCKPLSTGGNTLIILEPVINVRVLDWWHPLYPHSHNLEYLCNQE 351


>UniRef50_A7SQM0 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 361

 Score = 62.9 bits (146), Expect = 8e-09
 Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
 Frame = +1

Query: 10  QIKERTKTQDFITELGRIDANPDQDTQVLQVTCRNFHEVPPLMGMILSSVTMVHSHKAIH 189
           Q K RT T ++   +  ++ NP+++  VL V C N+   PP++G++L+ V    S    H
Sbjct: 255 QKKPRTYTPEWFATVDDVNDNPEENNSVLSVVCMNYIPFPPVIGLVLTEVLTGLSAGMKH 314

Query: 190 QRLYLDFNT-GSYNVGKDILPECTVVLDTVLNMHVYDWWHPKYPH 321
           QR+ + F+    Y + K       V+LD    + V  WW P YP+
Sbjct: 315 QRVKMRFHAHRDYGLYKQ-ESGIQVILDPAREVKVLKWWDPLYPY 358


>UniRef50_Q4SRB0 Cluster: Chromosome 11 SCAF14528, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 11
           SCAF14528, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 389

 Score = 40.7 bits (91), Expect(2) = 1e-06
 Identities = 20/44 (45%), Positives = 26/44 (59%)
 Frame = +1

Query: 46  TELGRIDANPDQDTQVLQVTCRNFHEVPPLMGMILSSVTMVHSH 177
           T+   + ANPD D  +LQVT  NF   P +MGM LS V++   H
Sbjct: 261 TQYVDVHANPDSDCYMLQVTTLNFIFTPVVMGMTLSLVSLFPQH 304



 Score = 34.7 bits (76), Expect(2) = 1e-06
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +1

Query: 187 HQRLYLDFNTGSYNVGKDILPE--CTVVLDTVLNMHVYDWWHPKYP 318
           H R+ L F       GK         V+LD V ++ + +WWHP+YP
Sbjct: 341 HHRVRLLFQDSPLQRGKKRADHGGTQVLLDPVQSVRIIEWWHPQYP 386


>UniRef50_UPI0000E47B29 Cluster: PREDICTED: hypothetical protein;
           n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 394

 Score = 45.2 bits (102), Expect = 0.002
 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
 Frame = +1

Query: 67  ANPDQDTQVLQVTCRNFHEVPP--LMGMILSSVTMVHSHKAIHQRLYLDFNT----GSYN 228
           AN ++   +L+V C +F +VP   +MG+ L   ++  S    H R+ L+F      G Y 
Sbjct: 282 ANDNRWECILRVHCEHFQDVPSAKIMGLQLVRSSVSVSANMRHHRVKLEFGRKGRRGLY- 340

Query: 229 VGKDILPECTVVLDTVLNMHVYDWWHPKY 315
           V   I+P   V LD VL + V  WWHP++
Sbjct: 341 VKSSIVP---VFLDPVLKVDVLHWWHPQF 366


>UniRef50_O13936 Cluster: Transcription elongation factor spt5; n=2;
           Schizosaccharomyces pombe|Rep: Transcription elongation
           factor spt5 - Schizosaccharomyces pombe (Fission yeast)
          Length = 990

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
 Frame = -3

Query: 186 DGLVRVDHGHRGQNHAHQWWDFVKVAAG-YLQNLGVLVRISVDPAQ-LRDKILCFSTLFY 13
           DGL R+D   RG     +  D+VKV AG Y  + G++VRIS D    L D ++   T+F 
Sbjct: 506 DGL-RLDVPSRGLRKRFRHGDYVKVIAGKYKDDTGMVVRISKDEVTFLSDTLMTELTVFS 564

Query: 12  LEL 4
            +L
Sbjct: 565 RDL 567


>UniRef50_A6DPE3 Cluster: Putative uncharacterized protein; n=1;
           Lentisphaera araneosa HTCC2155|Rep: Putative
           uncharacterized protein - Lentisphaera araneosa HTCC2155
          Length = 488

 Score = 33.9 bits (74), Expect = 4.5
 Identities = 22/61 (36%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
 Frame = -3

Query: 186 DGL-VRVDHGHRGQNHAHQWWDFVKVAAGYLQNLGVLVRISVDPAQLRDKILCFSTLFYL 10
           DGL VR      G     QW D+ K+   Y Q  G    + VDPA L    L  S  F  
Sbjct: 401 DGLEVRAGADSNGDGKVDQWTDWQKIKESYTQKPGFARIVDVDPATLDCSSLPASQSFQF 460

Query: 9   E 7
           E
Sbjct: 461 E 461


>UniRef50_Q16FN0 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 345

 Score = 33.9 bits (74), Expect = 4.5
 Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
 Frame = +1

Query: 28  KTQDFITELGRIDANPDQDTQVLQVTCRNFHEVPPLMGMI-LSSVTMVHSHKAIHQRLYL 204
           K +D +  L    +NP++  Q+L +T    H +P     + + S T   +   I+ ++ L
Sbjct: 221 KQKDSLEYLQDTYSNPEEGCQILIITTDTMHLLPYYHEQLTVKSFTQTLAQGLINYKVRL 280

Query: 205 DFNTGSYNVGKDILPECTVVLDTVLNMHVYDWWHPKYPHFDNKTPTCTEDDE 360
                  N  + ++ E  +V   V  + + DWW+P+Y   D       E++E
Sbjct: 281 QMA----NYCQRVVDE--IVFVPVRRVRLLDWWNPEYYREDPTIEKKREEEE 326


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 668,016,693
Number of Sequences: 1657284
Number of extensions: 12538995
Number of successful extensions: 35024
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 33505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34979
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64615845515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)