Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22a12
         (761 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    32   0.98 
AY113481-1|AAM29486.1|  253|Drosophila melanogaster RE45066p pro...    31   1.3  
AE013599-3521|AAF46938.1|  253|Drosophila melanogaster CG9896-PA...    31   1.3  
X89811-1|CAA61938.1|  393|Drosophila melanogaster ssrp2 protein.       30   4.0  
U13881-1|AAA50238.1|  393|Drosophila melanogaster DNA-binding pr...    30   4.0  
AE014298-2370|AAS65386.1|  393|Drosophila melanogaster CG12223-P...    30   4.0  
AY060841-1|AAL28389.1|  385|Drosophila melanogaster GM02110p pro...    29   6.9  
AE014298-2374|AAF48594.2|  385|Drosophila melanogaster CG12223-P...    29   6.9  
AE014298-2373|AAN09396.1|  385|Drosophila melanogaster CG12223-P...    29   6.9  
AE014298-2372|AAN09395.1|  385|Drosophila melanogaster CG12223-P...    29   6.9  
AE014298-2371|AAN09394.2|  386|Drosophila melanogaster CG12223-P...    29   6.9  
AE014296-1722|AAF50215.2|  827|Drosophila melanogaster CG6754-PB...    29   6.9  

>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
            protein.
          Length = 23015

 Score = 31.9 bits (69), Expect = 0.98
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = -3

Query: 432  AFLDPRC-RTKTCVCNVW--RITCRRNCAPKRCCS 337
            A+  P+C RT+ C C     R  CR  C PKR C+
Sbjct: 3337 AYCAPKCSRTEDCACGQQCARGKCRNKCGPKRQCT 3371


>AY113481-1|AAM29486.1|  253|Drosophila melanogaster RE45066p
           protein.
          Length = 253

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 19/74 (25%), Positives = 31/74 (41%)
 Frame = +3

Query: 57  YDKIENKYKLKYTFDCATNNNERILFGAIQERKSYLCCALNEQLNCVMHKCVPVIFGTRL 236
           ++   N+Y+    F     N E    G + E    +CC++NE ++C        I G   
Sbjct: 131 FEVCSNRYRETMVFLKPNKNQENSENGTLNENIKTICCSINELVDC-SEDAARKICGNEA 189

Query: 237 DKQFRETDDIDANN 278
            K  R+  D  AN+
Sbjct: 190 AKFTRQLVDKYANS 203


>AE013599-3521|AAF46938.1|  253|Drosophila melanogaster CG9896-PA
           protein.
          Length = 253

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 19/74 (25%), Positives = 31/74 (41%)
 Frame = +3

Query: 57  YDKIENKYKLKYTFDCATNNNERILFGAIQERKSYLCCALNEQLNCVMHKCVPVIFGTRL 236
           ++   N+Y+    F     N E    G + E    +CC++NE ++C        I G   
Sbjct: 131 FEVCSNRYRETMVFLKPNKNQENSENGTLNENIKTICCSINELVDC-SEDAARKICGNEA 189

Query: 237 DKQFRETDDIDANN 278
            K  R+  D  AN+
Sbjct: 190 AKFTRQLVDKYANS 203


>X89811-1|CAA61938.1|  393|Drosophila melanogaster ssrp2 protein.
          Length = 393

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 19/50 (38%), Positives = 29/50 (58%)
 Frame = +2

Query: 308 QIFEFSQHNDEQQRFGAQFLRQVIRQTLQTHVFVRQRGSRKAH*SCNPTS 457
           QI +  QH   QQ+  AQ  +QV +Q LQ H  V Q+  ++AH + + T+
Sbjct: 6   QIQQTIQHY--QQQLAAQQQQQVQQQQLQQHQVVVQQNQQQAHQNSSNTT 53


>U13881-1|AAA50238.1|  393|Drosophila melanogaster DNA-binding
           protein protein.
          Length = 393

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 19/50 (38%), Positives = 29/50 (58%)
 Frame = +2

Query: 308 QIFEFSQHNDEQQRFGAQFLRQVIRQTLQTHVFVRQRGSRKAH*SCNPTS 457
           QI +  QH   QQ+  AQ  +QV +Q LQ H  V Q+  ++AH + + T+
Sbjct: 6   QIQQTIQHY--QQQLAAQQQQQVQQQQLQQHQVVVQQNQQQAHQNSSNTT 53


>AE014298-2370|AAS65386.1|  393|Drosophila melanogaster CG12223-PE,
           isoform E protein.
          Length = 393

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 19/50 (38%), Positives = 29/50 (58%)
 Frame = +2

Query: 308 QIFEFSQHNDEQQRFGAQFLRQVIRQTLQTHVFVRQRGSRKAH*SCNPTS 457
           QI +  QH   QQ+  AQ  +QV +Q LQ H  V Q+  ++AH + + T+
Sbjct: 6   QIQQTIQHY--QQQLAAQQQQQVQQQQLQQHQVVVQQNQQQAHQNSSNTT 53


>AY060841-1|AAL28389.1|  385|Drosophila melanogaster GM02110p
           protein.
          Length = 385

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 15/44 (34%), Positives = 26/44 (59%)
 Frame = +2

Query: 326 QHNDEQQRFGAQFLRQVIRQTLQTHVFVRQRGSRKAH*SCNPTS 457
           +H  + Q+  AQ  +QV +Q LQ H  V Q+  ++AH + + T+
Sbjct: 2   EHFHQIQQLAAQQQQQVQQQQLQQHQVVVQQNQQQAHQNSSNTT 45


>AE014298-2374|AAF48594.2|  385|Drosophila melanogaster CG12223-PC,
           isoform C protein.
          Length = 385

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 15/44 (34%), Positives = 26/44 (59%)
 Frame = +2

Query: 326 QHNDEQQRFGAQFLRQVIRQTLQTHVFVRQRGSRKAH*SCNPTS 457
           +H  + Q+  AQ  +QV +Q LQ H  V Q+  ++AH + + T+
Sbjct: 2   EHFHQIQQLAAQQQQQVQQQQLQQHQVVVQQNQQQAHQNSSNTT 45


>AE014298-2373|AAN09396.1|  385|Drosophila melanogaster CG12223-PB,
           isoform B protein.
          Length = 385

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 15/44 (34%), Positives = 26/44 (59%)
 Frame = +2

Query: 326 QHNDEQQRFGAQFLRQVIRQTLQTHVFVRQRGSRKAH*SCNPTS 457
           +H  + Q+  AQ  +QV +Q LQ H  V Q+  ++AH + + T+
Sbjct: 2   EHFHQIQQLAAQQQQQVQQQQLQQHQVVVQQNQQQAHQNSSNTT 45


>AE014298-2372|AAN09395.1|  385|Drosophila melanogaster CG12223-PA,
           isoform A protein.
          Length = 385

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 15/44 (34%), Positives = 26/44 (59%)
 Frame = +2

Query: 326 QHNDEQQRFGAQFLRQVIRQTLQTHVFVRQRGSRKAH*SCNPTS 457
           +H  + Q+  AQ  +QV +Q LQ H  V Q+  ++AH + + T+
Sbjct: 2   EHFHQIQQLAAQQQQQVQQQQLQQHQVVVQQNQQQAHQNSSNTT 45


>AE014298-2371|AAN09394.2|  386|Drosophila melanogaster CG12223-PD,
           isoform D protein.
          Length = 386

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +2

Query: 341 QQRFGAQFLRQVIRQTLQTHVFVRQRGSRKAH*SCNPTS 457
           QQ+  AQ  +QV +Q LQ H  V Q+  ++AH + + T+
Sbjct: 8   QQQLAAQQQQQVQQQQLQQHQVVVQQNQQQAHQNSSNTT 46


>AE014296-1722|AAF50215.2|  827|Drosophila melanogaster CG6754-PB
           protein.
          Length = 827

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
 Frame = +3

Query: 393 KRMFLYGNVDQE-----KHINRAIQLVYDKQNDVLFARDVYASDYVVTEDLNSVLE 545
           K   +YG+V Q+     K IN  ++  +  ++DV+  + V +S    TE +N++LE
Sbjct: 238 KHFDMYGSVVQKAGATCKDINSGVRKTFLTKSDVIVIQYVPSSQSQATESINNILE 293


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,376,311
Number of Sequences: 53049
Number of extensions: 670041
Number of successful extensions: 2024
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1993
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)