Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22a12
         (761 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical pr...    31   1.2  
Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z96048-3|CAB09418.1|  733|Caenorhabditis elegans Hypothetical pr...    29   4.8  
Z34533-1|CAA84302.3|  730|Caenorhabditis elegans Hypothetical pr...    28   8.3  
U50311-9|AAA92313.1|  137|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical
           protein C27A2.5 protein.
          Length = 188

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -3

Query: 414 CRTKTCVCNVWRITCRRNCAPKRCCS 337
           CR K C C     TC R C   RCC+
Sbjct: 88  CRPKCCCCCRRCCTCCRTCCCTRCCT 113


>Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical
           protein R13H4.8 protein.
          Length = 212

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -3

Query: 414 CRTKTCVCNVWRITCRRNCAPKRCCS 337
           CR + C C     TC R C   RCC+
Sbjct: 89  CRPRCCCCCRRCCTCCRTCCCTRCCT 114


>Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical
           protein T01B7.8 protein.
          Length = 164

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -3

Query: 414 CRTKTCVCNVWRITCRRNCAPKRCCS 337
           CR + C C     TC R C   RCC+
Sbjct: 87  CRPRCCCCCRRCCTCCRTCCCTRCCT 112


>U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical
           protein C04G6.10 protein.
          Length = 166

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -3

Query: 414 CRTKTCVCNVWRITCRRNCAPKRCCS 337
           CR + C C     TC R C   RCC+
Sbjct: 88  CRPRCCCCCRRCCTCCRTCCCTRCCT 113


>U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical
           protein C04G6.7 protein.
          Length = 197

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -3

Query: 414 CRTKTCVCNVWRITCRRNCAPKRCCS 337
           CR + C C     TC R C   RCC+
Sbjct: 89  CRPRCCCCCRRCCTCCRTCCCTRCCT 114


>Z96048-3|CAB09418.1|  733|Caenorhabditis elegans Hypothetical
           protein F57A10.3 protein.
          Length = 733

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -2

Query: 481 KTSFCLS*TSWIARLMCFS*STLPYKNMRLQCLA 380
           K+SF +S  S ++RL C   S++P  + RL C A
Sbjct: 63  KSSFHMSLLSHLSRLCCSKCSSIPSSSTRLFCFA 96


>Z34533-1|CAA84302.3|  730|Caenorhabditis elegans Hypothetical
           protein B0285.1 protein.
          Length = 730

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 16/52 (30%), Positives = 28/52 (53%)
 Frame = -1

Query: 686 IGQTIYRIVYVVIHNNFYVFHELLFVKRVVFEEKIERFPFAAVGQIRFQHRI 531
           IG+  Y  VY  ++N   +  E + +KRV  E + E FP  A+ +I+   ++
Sbjct: 317 IGEGTYGQVYKAVNN---LTGEQVALKRVRLENEKEGFPITAIREIKILRQL 365


>U50311-9|AAA92313.1|  137|Caenorhabditis elegans Hypothetical
           protein C25E10.8 protein.
          Length = 137

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 6/50 (12%)
 Frame = -3

Query: 435 CAFLDPRCRTKTCVCNVWRITCRRNC------APKRCCSSLCWENSKICR 304
           C         KTC  N   + C  +C       PK C S+ C EN+  C+
Sbjct: 9   CFIAAATAANKTCGANEEMVACHDHCETQCGYTPKVCLSAQCIENACDCK 58


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,655,290
Number of Sequences: 27780
Number of extensions: 364221
Number of successful extensions: 1072
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1066
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)