Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22a07
         (749 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6UQT6 Cluster: Putative uncharacterized protein; n=1; ...    37   0.61 
UniRef50_Q9FJT9 Cluster: Zinc protease PQQL-like protein; n=1; A...    36   1.1  
UniRef50_Q6CW07 Cluster: Similarities with sp|P53243 Saccharomyc...    36   1.1  
UniRef50_A7I1I9 Cluster: Polar amino acid ABC uptake transporter...    36   1.4  
UniRef50_Q23VB5 Cluster: PX domain containing protein; n=1; Tetr...    35   1.9  
UniRef50_Q5DY63 Cluster: Channel protein VirB9; n=1; Vibrio fisc...    34   3.3  
UniRef50_Q085F4 Cluster: Putative uncharacterized protein precur...    34   3.3  
UniRef50_Q6QGD3 Cluster: Putative uncharacterized protein; n=2; ...    34   4.3  
UniRef50_UPI0000DB77DC Cluster: PREDICTED: similar to CG11596-PA...    33   7.5  
UniRef50_Q81PQ7 Cluster: Acetyltransferase, GNAT family; n=11; B...    33   9.9  

>UniRef50_A6UQT6 Cluster: Putative uncharacterized protein; n=1;
            Methanococcus vannielii SB|Rep: Putative uncharacterized
            protein - Methanococcus vannielii SB
          Length = 1027

 Score = 36.7 bits (81), Expect = 0.61
 Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
 Frame = +3

Query: 279  SLNVEVIEKVSEALSEVHKKSRFRWKLVVLRSFHLEEVVKQSDLTGRVAIDFVIIALDTS 458
            S N+E+ EKV   + +  K   F+  L VL    LEE  K  +  G   ID++  A D S
Sbjct: 919  SSNLEIREKVLGLIKDDEKWIVFKKALEVLYICKLEENPKLLEEVGTKLIDYLKTAHDDS 978

Query: 459  RLFCLEWAK-KELSQVHPDLRRRRVVLVNTS 548
            +LF +++ K K + ++  +L  + ++  ++S
Sbjct: 979  KLFLIKFFKIKGIGKISDELFEKLMMYKDSS 1009


>UniRef50_Q9FJT9 Cluster: Zinc protease PQQL-like protein; n=1;
           Arabidopsis thaliana|Rep: Zinc protease PQQL-like
           protein - Arabidopsis thaliana (Mouse-ear cress)
          Length = 956

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
 Frame = +3

Query: 93  NISRHY-KLKPEFQC--KNIETKSV*LIDHIVFIQRKMSLLEEDAVIAPW 233
           ++SR+  KL+    C  K++E KS   IDH+  +  K++ LEE+ +IAPW
Sbjct: 420 DVSRYSEKLRTSCGCVIKSMEPKSAATIDHMRNVVSKVNSLEEEKMIAPW 469


>UniRef50_Q6CW07 Cluster: Similarities with sp|P53243 Saccharomyces
           cerevisiae YGR067c singleton; n=1; Kluyveromyces
           lactis|Rep: Similarities with sp|P53243 Saccharomyces
           cerevisiae YGR067c singleton - Kluyveromyces lactis
           (Yeast) (Candida sphaerica)
          Length = 922

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
 Frame = +3

Query: 6   YIKLWLEIVQTINKPISLTVNSSIRRVHINISRHYKLKPEFQCKNI--ETKSV*LID 170
           YI  W E +Q +  P   TVN S  + H+N +R +  + +F  ++I  E KS+ LI+
Sbjct: 518 YIATWFEFIQDVIPPTKETVNVSWAKFHLN-NRWFHHRVDFSAESILQELKSIPLIE 573


>UniRef50_A7I1I9 Cluster: Polar amino acid ABC uptake transporter
           substrate binding protein; n=3; Campylobacter hominis
           ATCC BAA-381|Rep: Polar amino acid ABC uptake
           transporter substrate binding protein - Campylobacter
           hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146
           /CH001A)
          Length = 271

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 20/56 (35%), Positives = 30/56 (53%)
 Frame = +3

Query: 546 SGLPVNAMAITAGELINFYTENNVDLLTADISNTENTTLLAQKLLKYMEVSIGVRT 713
           SG  V   A++A + I F  +N+VDL+ A ++ T+    L      Y  V+IGV T
Sbjct: 68  SGGNVEFKAVSANDRIKFLQDNSVDLVIATLTITDERAKLVDFSNPYFAVNIGVLT 123


>UniRef50_Q23VB5 Cluster: PX domain containing protein; n=1;
           Tetrahymena thermophila SB210|Rep: PX domain containing
           protein - Tetrahymena thermophila SB210
          Length = 735

 Score = 35.1 bits (77), Expect = 1.9
 Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
 Frame = +3

Query: 6   YIKLWLEIVQTINKP-ISLTVN-SSIRRVHINISRHYKLKPEFQCKNIETKSV*LIDHIV 179
           ++K  ++I    NK  + L +  S +R++H  + +H+K  P+F  K I+T S  L D ++
Sbjct: 442 HVKYQIKITNLSNKCYVKLQMRYSELRQMHQALKQHFKNMPKFPSKIIKTNSSALQDRMI 501

Query: 180 FIQRKMS-LLEED 215
            +Q  +  LL ED
Sbjct: 502 QLQLYLCILLNED 514


>UniRef50_Q5DY63 Cluster: Channel protein VirB9; n=1; Vibrio
           fischeri ES114|Rep: Channel protein VirB9 - Vibrio
           fischeri (strain ATCC 700601 / ES114)
          Length = 302

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = -2

Query: 730 FILGIPVLTPIDTSIYFSNFWANNVV 653
           F L IPV +P+D++I +S + ANNVV
Sbjct: 17  FALNIPVQSPLDSNIQYSTYQANNVV 42


>UniRef50_Q085F4 Cluster: Putative uncharacterized protein
           precursor; n=1; Shewanella frigidimarina NCIMB 400|Rep:
           Putative uncharacterized protein precursor - Shewanella
           frigidimarina (strain NCIMB 400)
          Length = 235

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 16/70 (22%), Positives = 40/70 (57%)
 Frame = -2

Query: 361 TNFHRKRLFL*TSDNASDTFSITSTFKERTIAVKLFLALIGPTHGAITASSSSSDIFR*I 182
           T+ H +++ +  +D  +  FS+T T  E  ++  +F  L+ P H + T   +++ IF+ +
Sbjct: 158 TSKHLRKIIIRNTDEINPAFSVTLTKFELELSFDVFEGLVMPAHTSTTIMGTAA-IFKSL 216

Query: 181 KTMWSINHTD 152
            ++ ++ ++D
Sbjct: 217 DSVQTVTYSD 226


>UniRef50_Q6QGD3 Cluster: Putative uncharacterized protein; n=2;
           Enterobacteria phage T5|Rep: Putative uncharacterized
           protein - Bacteriophage T5
          Length = 277

 Score = 33.9 bits (74), Expect = 4.3
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 164 NRPHCFYSTENVTTGRRCSYCSMGW 238
           N   CF + + +T G+RC YCS+ W
Sbjct: 151 NGHDCFITLDGLTQGKRCPYCSLKW 175


>UniRef50_UPI0000DB77DC Cluster: PREDICTED: similar to CG11596-PA,
           isoform A; n=2; Endopterygota|Rep: PREDICTED: similar to
           CG11596-PA, isoform A - Apis mellifera
          Length = 380

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
 Frame = +3

Query: 477 WAKKELSQVHPDLRRRRVVL--VNTSGLPVNAM-AITAGELINFYTENN 614
           W  + ++ + P+ + + V    VN S LP NA  ++ AG+ +  YTENN
Sbjct: 205 WVHQYMNNLKPEHQTQAVFFPDVNPSDLPENAQFSMAAGDFLEVYTENN 253


>UniRef50_Q81PQ7 Cluster: Acetyltransferase, GNAT family; n=11;
           Bacillus|Rep: Acetyltransferase, GNAT family - Bacillus
           anthracis
          Length = 165

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = +3

Query: 492 LSQVHPDLRRRRVVLVNTSGLPVNAMAITAGELINFYTENNVDLLTADISNTEN 653
           L +   D  +  +V+++ +G+PV   A+  G+ +  +TEN   LL    S   N
Sbjct: 41  LKKAKNDRTKNVIVILDYNGVPVGLFALQTGDRVQEFTENESALLLTSFSINHN 94


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 640,451,452
Number of Sequences: 1657284
Number of extensions: 11178677
Number of successful extensions: 28294
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 27564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28287
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)