Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22a07
         (749 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   2.6  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   4.6  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   4.6  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    22   6.0  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = +3

Query: 12  KLWLEIVQTINKPISLTVNS 71
           ++W ++++T NKP +L V S
Sbjct: 116 EVWSKLIETGNKPPTLPVTS 135


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = -2

Query: 664 NNVVFSVLEISAVNKSTLFSV*KFINSPAVIAIAF 560
           N  VF+     A+N+ST+F +   I +  ++ + F
Sbjct: 290 NVPVFAAARFYAINRSTIFRMFNAIVTFLIVMVQF 324


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = -2

Query: 664 NNVVFSVLEISAVNKSTLFSV*KFINSPAVIAIAF 560
           N  VF+     A+N+ST+F +   I +  ++ + F
Sbjct: 610 NVPVFAAARFYAINRSTIFRMFNAIVTFLIVMVQF 644


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = -2

Query: 697 DTSIYFSNFWANNVVFSVLEISAVNKSTLFSV*KFINSPAVIAIAF 560
           +  I+      N   F      ++++STLFSV   + +  ++ I F
Sbjct: 203 EVQIFIDVVQHNRPEFKAARFFSIDRSTLFSVLNSLTTFLLVMIQF 248


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,985
Number of Sequences: 336
Number of extensions: 3066
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)