Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22a07
         (749 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    29   0.20 
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    24   5.8  

>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 28.7 bits (61), Expect = 0.20
 Identities = 21/70 (30%), Positives = 29/70 (41%)
 Frame = +3

Query: 525 RVVLVNTSGLPVNAMAITAGELINFYTENNVDLLTADISNTENTTLLAQKLLKYMEVSIG 704
           R  L+   G P+N +    G+L N     + +LL      +E TT     L K       
Sbjct: 114 RQTLIFPDGKPLNMILDDGGDLTNLVHAEHPELLKEIRGLSEETTTGVHNLYKMFREG-- 171

Query: 705 VRTGIPNINV 734
            R G+P INV
Sbjct: 172 -RLGMPAINV 180


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 57  LTVNSSIRRVHINISRHYK 113
           L     IR  HIN++ H+K
Sbjct: 662 LNAQQEIRHSHINVTEHFK 680


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,166
Number of Sequences: 2352
Number of extensions: 12129
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)