Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22a05
         (802 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   5.8  
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          22   7.6  
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    22   7.6  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 306 YTLINITLKKIR*IPCYKYFENL 374
           + L   TL  +  + CYKY+ N+
Sbjct: 308 HILQKTTLNMLTQVECYKYYGNI 330


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 273 LVLP*LTWFFFYTLINITLKKIR 341
           L++P  T    Y  I +TLKK+R
Sbjct: 74  LIVPVFTIVSSYAAIVLTLKKVR 96


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 621 SSVSHLTMHFPKNFGAETTKIYY 689
           SS+S+ T+H   N+     K+YY
Sbjct: 316 SSLSNKTIHNNNNYKNYNKKLYY 338


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,164
Number of Sequences: 438
Number of extensions: 4310
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)