Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22a04
         (781 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070889-1|AAL48511.1|  706|Drosophila melanogaster LD46223p pro...    29   5.4  
AE013599-574|AAM68847.1|  702|Drosophila melanogaster CG12769-PB...    29   5.4  
AE013599-573|AAF59146.3|  706|Drosophila melanogaster CG12769-PA...    29   5.4  
AY118336-1|AAM48365.1| 1307|Drosophila melanogaster LD28489p pro...    29   7.2  
AY051858-1|AAK93282.1| 1074|Drosophila melanogaster LD35689p pro...    29   7.2  
AE014297-996|AAF54422.3| 4671|Drosophila melanogaster CG9492-PA ...    29   7.2  
AE014134-3012|AAN11020.1| 1307|Drosophila melanogaster CG31793-P...    29   7.2  
AY113457-1|AAM29462.1|  825|Drosophila melanogaster RE36839p pro...    29   9.5  

>AY070889-1|AAL48511.1|  706|Drosophila melanogaster LD46223p
           protein.
          Length = 706

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = -3

Query: 272 AERGESSAAQ*PMDPSPV*IRLSSGASSGPMVLRC 168
           A     S  Q P  P+P    LS+G  S PM  RC
Sbjct: 57  ASSASESELQEPRSPTPTPTNLSTGPHSPPMTFRC 91


>AE013599-574|AAM68847.1|  702|Drosophila melanogaster CG12769-PB,
           isoform B protein.
          Length = 702

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = -3

Query: 272 AERGESSAAQ*PMDPSPV*IRLSSGASSGPMVLRC 168
           A     S  Q P  P+P    LS+G  S PM  RC
Sbjct: 53  ASSASESELQEPRSPTPTPTNLSTGPHSPPMTFRC 87


>AE013599-573|AAF59146.3|  706|Drosophila melanogaster CG12769-PA,
           isoform A protein.
          Length = 706

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = -3

Query: 272 AERGESSAAQ*PMDPSPV*IRLSSGASSGPMVLRC 168
           A     S  Q P  P+P    LS+G  S PM  RC
Sbjct: 57  ASSASESELQEPRSPTPTPTNLSTGPHSPPMTFRC 91


>AY118336-1|AAM48365.1| 1307|Drosophila melanogaster LD28489p protein.
          Length = 1307

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
 Frame = +1

Query: 421  SNMKNETDGVIQSTLRTASSDPTFF---HRLDQRADFPPQVSVQLIHITGFPGCGKTFPV 591
            +N+  +TD +IQ+T+R    D T     HRL+   D    + +   H+  F   G  + +
Sbjct: 1215 ANVDPQTDALIQATIRNKFKDCTVLTIAHRLNTIMDSDKVLVMDAGHVVEF---GSPYEL 1271

Query: 592  TQLLKTKAFKG 624
                K K F G
Sbjct: 1272 LTASKAKVFHG 1282


>AY051858-1|AAK93282.1| 1074|Drosophila melanogaster LD35689p protein.
          Length = 1074

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
 Frame = +1

Query: 421  SNMKNETDGVIQSTLRTASSDPTFF---HRLDQRADFPPQVSVQLIHITGFPGCGKTFPV 591
            +N+  +TD +IQ+T+R    D T     HRL+   D    + +   H+  F   G  + +
Sbjct: 982  ANVDPQTDALIQATIRNKFKDCTVLTIAHRLNTIMDSDKVLVMDAGHVVEF---GSPYEL 1038

Query: 592  TQLLKTKAFKG 624
                K K F G
Sbjct: 1039 LTASKAKVFHG 1049


>AE014297-996|AAF54422.3| 4671|Drosophila melanogaster CG9492-PA
            protein.
          Length = 4671

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +1

Query: 433  NETDGVIQSTLRTASSDPTFFHRLDQRADFPPQVSVQLIHITGFPGCGK 579
            NE    I + +   S D   F+ L++  DF   V VQ +   G PG G+
Sbjct: 2686 NEWGDQITNEIVRQSMDMKGFYSLEKPGDFTTIVDVQYVAAMGLPGGGR 2734


>AE014134-3012|AAN11020.1| 1307|Drosophila melanogaster CG31793-PA
            protein.
          Length = 1307

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
 Frame = +1

Query: 421  SNMKNETDGVIQSTLRTASSDPTFF---HRLDQRADFPPQVSVQLIHITGFPGCGKTFPV 591
            +N+  +TD +IQ+T+R    D T     HRL+   D    + +   H+  F   G  + +
Sbjct: 1215 ANVDPQTDALIQATIRNKFKDCTVLTIAHRLNTIMDSDKVLVMDAGHVVEF---GSPYEL 1271

Query: 592  TQLLKTKAFKG 624
                K K F G
Sbjct: 1272 LTASKAKVFHG 1282


>AY113457-1|AAM29462.1|  825|Drosophila melanogaster RE36839p
           protein.
          Length = 825

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +1

Query: 85  ERSQGFSSEHLEALAWSLNYRVSYRHGEHLNTIGPDDAPLLSL 213
           E ++  + + L A+ W++N+   Y +G H  T+  D  PL  L
Sbjct: 547 ESNKSTTEQELSAIHWAINHFKPYIYGRHF-TVKTDHRPLTYL 588


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,349,683
Number of Sequences: 53049
Number of extensions: 873102
Number of successful extensions: 2427
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2424
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)