Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22a04
(781 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 25 0.79
X91509-1|CAA62809.1| 103|Apis mellifera histone H4 protein. 24 1.4
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 5.6
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 5.6
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 5.6
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 5.6
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 5.6
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 5.6
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 5.6
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 5.6
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 9.7
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 21 9.7
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 21 9.7
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 25.0 bits (52), Expect = 0.79
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 113 CSELKP*ERSKGPSRRESGKRVQR 42
C P R PSR+ESG+R +R
Sbjct: 389 CVACSPPPRQTPPSRKESGRRRRR 412
>X91509-1|CAA62809.1| 103|Apis mellifera histone H4 protein.
Length = 103
Score = 24.2 bits (50), Expect = 1.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 166 RHGDKRRDNSNSRRELRGVLS*SLESVLRD 77
R G +R + E RGVL LE+V+RD
Sbjct: 40 RRGGVKRISGLIYEETRGVLKVFLENVIRD 69
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.6
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +1
Query: 139 NYRVSYRHGEHLNTIGPDDAPLLSLIYTGD 228
NY +Y+ ++ N I + P+ IY G+
Sbjct: 100 NYNTNYKKLQYYNIINIEQIPVPVPIYCGN 129
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.6
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +1
Query: 139 NYRVSYRHGEHLNTIGPDDAPLLSLIYTGD 228
NY +Y+ ++ N I + P+ IY G+
Sbjct: 100 NYNTNYKKLQYYNIINIEQIPVPVPIYCGN 129
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.6
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +1
Query: 139 NYRVSYRHGEHLNTIGPDDAPLLSLIYTGD 228
NY +Y+ ++ N I + P+ IY G+
Sbjct: 100 NYNTNYKKLQYYNIINIEQIPVPVPIYCGN 129
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.6
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +1
Query: 139 NYRVSYRHGEHLNTIGPDDAPLLSLIYTGD 228
NY +Y+ ++ N I + P+ IY G+
Sbjct: 100 NYNTNYKKLQYYNIINIEQIPVPVPIYCGN 129
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.6
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +1
Query: 139 NYRVSYRHGEHLNTIGPDDAPLLSLIYTGD 228
NY +Y+ ++ N I + P+ IY G+
Sbjct: 100 NYNTNYKKLQYYNIINIEQIPVPVPIYCGN 129
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.6
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +1
Query: 139 NYRVSYRHGEHLNTIGPDDAPLLSLIYTGD 228
NY +Y+ ++ N I + P+ IY G+
Sbjct: 100 NYNTNYKKLQYYNIINIEQIPVPVPIYCGN 129
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.6
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +1
Query: 139 NYRVSYRHGEHLNTIGPDDAPLLSLIYTGD 228
NY +Y+ ++ N I + P+ IY G+
Sbjct: 104 NYNTNYKKLQYYNIINIEQIPVPVPIYCGN 133
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.6
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +1
Query: 139 NYRVSYRHGEHLNTIGPDDAPLLSLIYTGD 228
NY +Y+ ++ N I + P+ IY G+
Sbjct: 100 NYNTNYKKLQYYNIINIEQIPVPVPIYCGN 129
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 9.7
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -1
Query: 700 LRWKGVSCGLSIRNAT 653
+RW G + GLS R++T
Sbjct: 91 MRWPGDATGLSNRSST 106
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.4 bits (43), Expect = 9.7
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +1
Query: 628 YRVAVPTTELRSEWKDHMKLPSSEVWRV 711
Y+ + R+EW +K SEV RV
Sbjct: 380 YQNTMSNNNQRTEWSATVKAAISEVQRV 407
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.4 bits (43), Expect = 9.7
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +1
Query: 628 YRVAVPTTELRSEWKDHMKLPSSEVWRV 711
Y+ + R+EW +K SEV RV
Sbjct: 418 YQNTMSNNNQRTEWSATVKAAISEVQRV 445
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,940
Number of Sequences: 438
Number of extensions: 5403
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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