Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22a01
         (785 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0134 + 7082462-7082627,7084199-7084325,7084404-7084611,708...    30   2.4  
11_06_0145 - 20615044-20617167,20617444-20618076                       29   4.2  
01_06_1774 + 39803747-39803825,39805338-39805555,39805856-398064...    29   4.2  
11_01_0089 + 670597-672210                                             29   5.5  
07_01_0770 + 5912412-5912476,5913759-5913779,5914015-5914638,591...    29   5.5  
01_07_0124 + 41212728-41212922,41215156-41215210,41215336-412171...    28   7.3  

>02_02_0134 +
           7082462-7082627,7084199-7084325,7084404-7084611,
           7084864-7084990,7085071-7085255,7085332-7085454,
           7085777-7085836,7085980-7086117
          Length = 377

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -1

Query: 161 LY*IFVSGGLVIYFYERIIAFGPIDHRR 78
           LY IF   GL  YFYE +  + P +HR+
Sbjct: 213 LYGIFPYSGLKFYFYETMKTYVPEEHRK 240


>11_06_0145 - 20615044-20617167,20617444-20618076
          Length = 918

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = -1

Query: 455 LSSAGFVVFQPCVFERRQMTAVGVCDFDQHGIAYGTAVLIAKFDTHV 315
           L    F++   CV++R  +  VG+   D  G  Y   V+     +HV
Sbjct: 238 LKERNFLLLLDCVWQRLDLEEVGIPSLDLVGSCYNRRVVFTACSSHV 284


>01_06_1774 +
           39803747-39803825,39805338-39805555,39805856-39806436,
           39807239-39808136
          Length = 591

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +3

Query: 126 NYEATAYENLIKLKEQVDVHVSWNVWNGDIGDIAYVFF 239
           NY +TA  N+++     D H SW   N ++G + Y F+
Sbjct: 500 NYLSTALANIMRKVTTRDGHSSWLTDNINLGKLDYYFY 537


>11_01_0089 + 670597-672210
          Length = 537

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = -3

Query: 141 RWPRNLFLRAHNCVRP-NRSPACRESRWKRRPPTT 40
           RWPR LFL      RP  R+  C      R PPTT
Sbjct: 51  RWPRGLFLSPLTKPRPTRRAHQCVPHPRPRLPPTT 85


>07_01_0770 +
           5912412-5912476,5913759-5913779,5914015-5914638,
           5915264-5915439,5915526-5916124
          Length = 494

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = -1

Query: 737 FVRFVPSGHALLGFLYGGPRIVDGNFEIFASPARSLQSFKTSGYCFEGVVYSIATADG 564
           F   VP  H  +  +Y   R  +G+F   A+PA  L + K  GY  + V  +  +A+G
Sbjct: 391 FAEVVPPKHRTM--IYAFDRAFEGSFASLAAPAVGLVTEKIYGYDSKTVNLANGSAEG 446


>01_07_0124 +
           41212728-41212922,41215156-41215210,41215336-41217128,
           41217363-41217521,41217883-41218054,41218173-41218471,
           41219060-41219368
          Length = 993

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = +3

Query: 438 KPGRREDKIVAAYFVEWGVYGRSFPVDKVPLPNLSHLLYGFIPICGGDGINDA 596
           +PG RE  +   +     V  RS P+DK  L      ++  +    GDG NDA
Sbjct: 665 RPGVRE-AVATCHAAGINVMARSLPLDKHTLVTNLRGMFNEVVAVTGDGTNDA 716


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,986,055
Number of Sequences: 37544
Number of extensions: 549459
Number of successful extensions: 1677
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1677
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)