Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc21p22
(621 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016445-9|AAC69061.1| 156|Caenorhabditis elegans Hypothetical ... 31 0.66
U80442-5|AAB37668.2| 794|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribo... 29 2.0
AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribo... 29 2.0
AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribo... 29 2.0
Z70267-3|CAA94214.1| 534|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z70267-2|CAA94213.1| 525|Caenorhabditis elegans Hypothetical pr... 29 2.7
U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr... 29 3.5
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int... 29 3.5
AF098999-6|AAC68724.2| 787|Caenorhabditis elegans Half transpor... 28 4.7
Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical p... 28 6.2
Z70780-5|CAD91633.1| 779|Caenorhabditis elegans Hypothetical pr... 28 6.2
AC025722-7|AAK68510.1| 540|Caenorhabditis elegans Hypothetical ... 28 6.2
Z22174-2|CAA80130.2| 410|Caenorhabditis elegans Hypothetical pr... 27 8.2
U58758-6|AAO38577.1| 604|Caenorhabditis elegans Hypothetical pr... 27 8.2
U58758-5|AAL11107.1| 693|Caenorhabditis elegans Hypothetical pr... 27 8.2
U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical pr... 27 8.2
U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical pr... 27 8.2
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 27 8.2
U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activati... 27 8.2
L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical pr... 27 8.2
>AF016445-9|AAC69061.1| 156|Caenorhabditis elegans Hypothetical
protein T05B4.13 protein.
Length = 156
Score = 31.1 bits (67), Expect = 0.66
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = -3
Query: 349 NSMSRRTCLDSPTFNTATGSFTASCSDMASTCITFN--SSGLAS 224
N+ +RTC P+ TA+ S TAS S STC ++N SS L S
Sbjct: 87 NTYCQRTCGRCPSSTTASSSSTASSS---STCTSYNADSSSLCS 127
>U80442-5|AAB37668.2| 794|Caenorhabditis elegans Hypothetical
protein T20F5.6 protein.
Length = 794
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 156 DPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSLQ 278
+ EA A R+ K + ALL PDA PD N ++ + +Q
Sbjct: 690 EAEANANGQRAPKNIEMPALLNPDANPDAPNFKNLQPLQVQ 730
>AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-5 protein.
Length = 2238
Score = 29.5 bits (63), Expect = 2.0
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +3
Query: 510 DEDNEEGEPKGKKAKMSNNAKGKAASPKKNAXKMNKP 620
D+D++ P KK++++ A G + PK+ + P
Sbjct: 1579 DDDDDSSPPPAKKSRIAKEAAGPSTGPKRKKLVITDP 1615
>AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform a protein.
Length = 2276
Score = 29.5 bits (63), Expect = 2.0
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +3
Query: 510 DEDNEEGEPKGKKAKMSNNAKGKAASPKKNAXKMNKP 620
D+D++ P KK++++ A G + PK+ + P
Sbjct: 1617 DDDDDSSPPPAKKSRIAKEAAGPSTGPKRKKLVITDP 1653
>AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform b protein.
Length = 2238
Score = 29.5 bits (63), Expect = 2.0
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +3
Query: 510 DEDNEEGEPKGKKAKMSNNAKGKAASPKKNAXKMNKP 620
D+D++ P KK++++ A G + PK+ + P
Sbjct: 1579 DDDDDSSPPPAKKSRIAKEAAGPSTGPKRKKLVITDP 1615
>Z70267-3|CAA94214.1| 534|Caenorhabditis elegans Hypothetical
protein K04C1.2b protein.
Length = 534
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 519 NEEGEPKGKKAKMSNNAKGKAASPKKNAXKMNKP 620
N +P+ K S+ K SPKK+A +N+P
Sbjct: 187 NRNDDPQNSTPKCSDTKKNTKISPKKSASPINQP 220
>Z70267-2|CAA94213.1| 525|Caenorhabditis elegans Hypothetical
protein K04C1.2a protein.
Length = 525
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 519 NEEGEPKGKKAKMSNNAKGKAASPKKNAXKMNKP 620
N +P+ K S+ K SPKK+A +N+P
Sbjct: 178 NRNDDPQNSTPKCSDTKKNTKISPKKSASPINQP 211
>U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical
protein F57F4.4 protein.
Length = 2090
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = +2
Query: 326 ACTS--GH*IPRCACYIYSCSGFGASTLNWTPSPW 424
ACT+ G I C CY C+ TPSPW
Sbjct: 185 ACTNLAGTNIQGCCCYKQDCTSLAPMNNPPTPSPW 219
>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
interacting proteinprotein 1 protein.
Length = 2153
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = +2
Query: 326 ACTS--GH*IPRCACYIYSCSGFGASTLNWTPSPW 424
ACT+ G I C CY C+ TPSPW
Sbjct: 185 ACTNLAGTNIQGCCCYKQDCTSLAPMNNPPTPSPW 219
>AF098999-6|AAC68724.2| 787|Caenorhabditis elegans Half transporter
(pgp related)protein 4 protein.
Length = 787
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = -3
Query: 424 PRRWCPIKCTGPEP*TRVNVTGAS-GNSMSRRTCLDSPTFNTATGSFTA 281
PR+ + +GP+P +NV G S GN+MS L S +F+ + S T+
Sbjct: 742 PRKRPAVARSGPQPAASINVAGPSQGNAMS----LLSTSFSQSASSVTS 786
>Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical
protein M163.11 protein.
Length = 224
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -3
Query: 355 SGNSMSRRTCLDSPTFNTATGSFTAS-CSDMASTCITFNSSGLAS 224
S NS S + DS + ++T S T + C D STC ++ ++G +
Sbjct: 104 SSNSSSSTSSSDSTSVVSSTSSSTTTTCVDSFSTCTSWAANGFCT 148
>Z70780-5|CAD91633.1| 779|Caenorhabditis elegans Hypothetical
protein F46B6.5c protein.
Length = 779
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 534 PKGKKAKMSNNAKGKAASPKKNAXKMNKP 620
P G A+++N+ KG++ +P+K A KP
Sbjct: 687 PVGHLARLNNHPKGQSFAPRKGALLSAKP 715
>AC025722-7|AAK68510.1| 540|Caenorhabditis elegans Hypothetical
protein Y50D4C.5 protein.
Length = 540
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +3
Query: 501 QFKDEDNEEGEPKGKKAKMS--NNAKGKAASPKKNAXKMNKP 620
+FK DN++G+ K A+MS N G+A++ + K++ P
Sbjct: 93 KFKKSDNKKGKNDAKSARMSAPNLKIGEASTSQPQLPKISSP 134
>Z22174-2|CAA80130.2| 410|Caenorhabditis elegans Hypothetical
protein K01B6.3 protein.
Length = 410
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 594 SWAMQLCLWHYSTFSLFCPWVHLLHY 517
SWA+ +C+ STF+L C +LHY
Sbjct: 80 SWALLVCIIE-STFALICFLAVMLHY 104
>U58758-6|AAO38577.1| 604|Caenorhabditis elegans Hypothetical
protein ZK1127.9e protein.
Length = 604
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 498 SQFKDEDNEEGEPKGKKAKMSNNAKGKAASPKK 596
S+ + E +E+G PK KK++ + A+ KK
Sbjct: 186 SESESESDEDGPPKAKKSRAEKKKEALIAAQKK 218
>U58758-5|AAL11107.1| 693|Caenorhabditis elegans Hypothetical
protein ZK1127.9c protein.
Length = 693
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 498 SQFKDEDNEEGEPKGKKAKMSNNAKGKAASPKK 596
S+ + E +E+G PK KK++ + A+ KK
Sbjct: 186 SESESESDEDGPPKAKKSRAEKKKEALIAAQKK 218
>U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical
protein ZK1127.9a protein.
Length = 914
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 498 SQFKDEDNEEGEPKGKKAKMSNNAKGKAASPKK 596
S+ + E +E+G PK KK++ + A+ KK
Sbjct: 407 SESESESDEDGPPKAKKSRAEKKKEALIAAQKK 439
>U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical
protein ZK1127.9b protein.
Length = 905
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 498 SQFKDEDNEEGEPKGKKAKMSNNAKGKAASPKK 596
S+ + E +E+G PK KK++ + A+ KK
Sbjct: 398 SESESESDEDGPPKAKKSRAEKKKEALIAAQKK 430
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 507 KDEDNEEGEPKGKKAKMSNNAKGKAASPKKNAXK 608
K+ED+EE E K KK K N KK+ K
Sbjct: 152 KEEDDEEEEQKDKKKKDEKNDDDDEEDKKKDKKK 185
>U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activating
protein protein.
Length = 1439
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 85 VKSS*RTSFSMVSPFHHHISQRHGIQRQKQNTHAATSSS 201
V SS +T + S FHHH SQ G R +N A T+++
Sbjct: 700 VPSSSQTMATTSSSFHHHSSQA-GPSRDIENGEAPTATA 737
>L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical
protein C04D8.1 protein.
Length = 1317
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 85 VKSS*RTSFSMVSPFHHHISQRHGIQRQKQNTHAATSSS 201
V SS +T + S FHHH SQ G R +N A T+++
Sbjct: 578 VPSSSQTMATTSSSFHHHSSQA-GPSRDIENGEAPTATA 615
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,872,135
Number of Sequences: 27780
Number of extensions: 232690
Number of successful extensions: 854
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 852
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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