Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc21p09
         (585 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1297|AAS65063.1|  121|Drosophila melanogaster CG33276-P...   115   4e-26
AE014297-657|AAF54154.3| 1859|Drosophila melanogaster CG31187-PA...    31   1.5  
AY089596-1|AAL90334.1|  484|Drosophila melanogaster RE19263p pro...    29   3.5  
AE014296-3416|AAF51639.2|  484|Drosophila melanogaster CG11396-P...    29   3.5  
AE014296-2198|AAF49875.3| 1988|Drosophila melanogaster CG11008-P...    29   3.5  

>AE014296-1297|AAS65063.1|  121|Drosophila melanogaster CG33276-PA
           protein.
          Length = 121

 Score =  115 bits (277), Expect = 4e-26
 Identities = 56/105 (53%), Positives = 72/105 (68%)
 Frame = +1

Query: 220 LTVEVMFGGGAELLFNKVKRKEIALPPLKTFLPDSQNQNWTLKELLIWLKDNLLVEREEL 399
           L + + F  GAELLF  +KR+E+ L            Q WT+  LL W+  N+L ER EL
Sbjct: 26  LKIILEFSAGAELLFGNIKRRELNL---------DGKQKWTIANLLKWMHANILTERPEL 76

Query: 400 FLKDDSVRPGILVLINEEDWELHGQLNYELKENDKIMFISTLHGG 534
           FL+ D+VRPGILVLIN+ DWEL G+L+YEL+ ND ++FISTLHGG
Sbjct: 77  FLQGDTVRPGILVLINDTDWELLGELDYELQPNDNVLFISTLHGG 121


>AE014297-657|AAF54154.3| 1859|Drosophila melanogaster CG31187-PA
            protein.
          Length = 1859

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 19/54 (35%), Positives = 31/54 (57%)
 Frame = +1

Query: 295  PPLKTFLPDSQNQNWTLKELLIWLKDNLLVEREELFLKDDSVRPGILVLINEED 456
            PPL T   ++ N NW++ E++ WL+   L E  + FLK+D +R   L+ +   D
Sbjct: 1784 PPL-TNTREAAN-NWSVNEVVTWLETMQLSEYVDSFLKND-IRGKELLTLGRRD 1834


>AY089596-1|AAL90334.1|  484|Drosophila melanogaster RE19263p
           protein.
          Length = 484

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
 Frame = -3

Query: 388 FPPAGCPLTKSTALLTSNSDFENPVKMSSTAAVQFLSSL-LY*RAIPLRPQTSLLQLEFL 212
           FP A     K+  L T N+   N + +    A +   ++ LY RAI L PQ SL +   +
Sbjct: 380 FPEAYVIFQKALHLDTGNTMILNNMGVCLLYAGKLKDAINLYERAINLNPQKSLNESLLV 439

Query: 211 PFLSYGQFTNNNNRKFEYN 155
              +  +  +NN++  +YN
Sbjct: 440 NLSTLYELESNNSKAKKYN 458


>AE014296-3416|AAF51639.2|  484|Drosophila melanogaster CG11396-PA
           protein.
          Length = 484

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
 Frame = -3

Query: 388 FPPAGCPLTKSTALLTSNSDFENPVKMSSTAAVQFLSSL-LY*RAIPLRPQTSLLQLEFL 212
           FP A     K+  L T N+   N + +    A +   ++ LY RAI L PQ SL +   +
Sbjct: 380 FPEAYVIFQKALHLDTGNTMILNNMGVCLLYAGKLKDAINLYERAINLNPQKSLNESLLV 439

Query: 211 PFLSYGQFTNNNNRKFEYN 155
              +  +  +NN++  +YN
Sbjct: 440 NLSTLYELESNNSKAKKYN 458


>AE014296-2198|AAF49875.3| 1988|Drosophila melanogaster CG11008-PA
            protein.
          Length = 1988

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = -3

Query: 397  TLLFPPAGCPLTKSTALLTSNSDFENPVKMSSTAAVQFLSSL 272
            T L+ P   P  KST   +S  DFE P   SS++ V  +  L
Sbjct: 971  TQLYHPPKMPKNKSTHKTSSQEDFEVPQPASSSSNVSLIDVL 1012


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,526,863
Number of Sequences: 53049
Number of extensions: 494681
Number of successful extensions: 1135
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1134
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2338128087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)