Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc21p09
(585 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 25 0.41
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 22 5.1
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 22 5.1
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 5.1
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 22 5.1
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 22 5.1
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 22 5.1
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 5.1
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 6.7
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 6.7
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 8.9
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 8.9
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 8.9
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 8.9
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 8.9
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 8.9
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 8.9
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 8.9
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 25.4 bits (53), Expect = 0.41
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 129 CYKVKQITQLYSNFLLLLFVNCPYDRN 209
C+ K IT + + L L++ C YDR+
Sbjct: 25 CFVCKDITSTSALYRLKLYLFCDYDRD 51
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 5.1
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -3
Query: 205 LSYGQFTNNNNRKFEYN 155
LS NNNN K+ YN
Sbjct: 85 LSNKTIHNNNNYKYNYN 101
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 5.1
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -3
Query: 205 LSYGQFTNNNNRKFEYN 155
LS NNNN K+ YN
Sbjct: 85 LSNKTIHNNNNYKYNYN 101
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.8 bits (44), Expect = 5.1
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -3
Query: 205 LSYGQFTNNNNRKFEYN 155
LS NNNN K+ YN
Sbjct: 85 LSNRTIHNNNNYKYNYN 101
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.8 bits (44), Expect = 5.1
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -3
Query: 205 LSYGQFTNNNNRKFEYN 155
LS NNNN K+ YN
Sbjct: 85 LSNKTIHNNNNYKYNYN 101
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.8 bits (44), Expect = 5.1
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -3
Query: 205 LSYGQFTNNNNRKFEYN 155
LS NNNN K+ YN
Sbjct: 85 LSNKTIHNNNNYKYNYN 101
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.8 bits (44), Expect = 5.1
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -3
Query: 205 LSYGQFTNNNNRKFEYN 155
LS NNNN K+ YN
Sbjct: 85 LSNKTIHNNNNYKYNYN 101
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.8 bits (44), Expect = 5.1
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -3
Query: 205 LSYGQFTNNNNRKFEYN 155
LS NNNN K+ YN
Sbjct: 318 LSNKTIHNNNNYKYNYN 334
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.4 bits (43), Expect = 6.7
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -3
Query: 184 NNNNRKFEYN 155
NNNN K+ YN
Sbjct: 325 NNNNYKYNYN 334
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.4 bits (43), Expect = 6.7
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = +1
Query: 316 PDSQNQNWTLKELLI 360
PD+ ++NWT K + +
Sbjct: 1147 PDTDSENWTPKMMAV 1161
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.9
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 323 ESGKNVFNGGSAISFLFTLLKSNSAPPPNITSTVRVSAIS 204
E KN+ N + I+ T+L N N T T + AIS
Sbjct: 174 EEIKNILNKTNEITEHRTVLAVNIEKSENETKTCKKYAIS 213
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.9
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 323 ESGKNVFNGGSAISFLFTLLKSNSAPPPNITSTVRVSAIS 204
E KN+ N + I+ T+L N N T T + AIS
Sbjct: 174 EEIKNILNKTNEITEHRTVLAVNIEKSENETKTCKKYAIS 213
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.9
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 323 ESGKNVFNGGSAISFLFTLLKSNSAPPPNITSTVRVSAIS 204
E KN+ N + I+ T+L N N T T + AIS
Sbjct: 174 EEIKNILNKTNEITEHRTVLAVNIEKSENETKTCKKYAIS 213
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.9
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 323 ESGKNVFNGGSAISFLFTLLKSNSAPPPNITSTVRVSAIS 204
E KN+ N + I+ T+L N N T T + AIS
Sbjct: 174 EEIKNILNKTNEITEHRTVLAVNIEKSENETKTCKKYAIS 213
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.9
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 323 ESGKNVFNGGSAISFLFTLLKSNSAPPPNITSTVRVSAIS 204
E KN+ N + I+ T+L N N T T + AIS
Sbjct: 174 EEIKNILNKTNEITEHRTVLAVNIEKSENETKTCKKYAIS 213
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.9
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 323 ESGKNVFNGGSAISFLFTLLKSNSAPPPNITSTVRVSAIS 204
E KN+ N + I+ T+L N N T T + AIS
Sbjct: 174 EEIKNILNKTNEITEHRTVLAVNIEKSENETKTCKKYAIS 213
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.0 bits (42), Expect = 8.9
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 323 ESGKNVFNGGSAISFLFTLLKSNSAPPPNITSTVRVSAIS 204
E KN+ N + I+ T+L N N T T + AIS
Sbjct: 174 EEIKNILNKTNEITEHRTVLAVNIEKSENETKTCKKYAIS 213
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.9
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 323 ESGKNVFNGGSAISFLFTLLKSNSAPPPNITSTVRVSAIS 204
E KN+ N + I+ T+L N N T T + AIS
Sbjct: 174 EEIKNILNKTNEITEHRTVLAVNIEKSENETKTCKKYAIS 213
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,316
Number of Sequences: 438
Number of extensions: 3445
Number of successful extensions: 19
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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