Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc21o23
(605 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6 pr... 146 7e-35
D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein TAXRE... 145 9e-35
BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6 pr... 145 9e-35
BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6 pr... 145 9e-35
BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6 pr... 145 9e-35
BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6 pr... 145 9e-35
BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6 pr... 145 9e-35
BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6 pr... 145 9e-35
BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6 pr... 145 9e-35
AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6 pr... 145 9e-35
AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein TAX... 136 7e-32
X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6 prot... 125 1e-28
S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140 pro... 100 5e-21
>BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 146 bits (353), Expect = 7e-35
Identities = 77/169 (45%), Positives = 101/169 (59%), Gaps = 6/169 (3%)
Frame = +3
Query: 114 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 281
RN L GV R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGVGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 282 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLV 455
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 456 GILPSGLLLXTGPFAFNSCPLRRIPXRYVIGTSTXISLGNFKLPKHFXD 602
L SGLLL TGP N PLRR ++VI TST I + N K+PKH D
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTD 214
>D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 288
Score = 145 bits (352), Expect = 9e-35
Identities = 76/169 (44%), Positives = 101/169 (59%), Gaps = 6/169 (3%)
Frame = +3
Query: 114 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 281
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 282 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLV 455
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 456 GILPSGLLLXTGPFAFNSCPLRRIPXRYVIGTSTXISLGNFKLPKHFXD 602
L SGLLL TGP N PLRR ++VI TST I + N K+PKH D
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTD 214
>BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 145 bits (352), Expect = 9e-35
Identities = 76/169 (44%), Positives = 101/169 (59%), Gaps = 6/169 (3%)
Frame = +3
Query: 114 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 281
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 282 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLV 455
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 456 GILPSGLLLXTGPFAFNSCPLRRIPXRYVIGTSTXISLGNFKLPKHFXD 602
L SGLLL TGP N PLRR ++VI TST I + N K+PKH D
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTD 214
>BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 145 bits (352), Expect = 9e-35
Identities = 76/169 (44%), Positives = 101/169 (59%), Gaps = 6/169 (3%)
Frame = +3
Query: 114 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 281
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 282 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLV 455
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 456 GILPSGLLLXTGPFAFNSCPLRRIPXRYVIGTSTXISLGNFKLPKHFXD 602
L SGLLL TGP N PLRR ++VI TST I + N K+PKH D
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTD 214
>BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 145 bits (352), Expect = 9e-35
Identities = 76/169 (44%), Positives = 101/169 (59%), Gaps = 6/169 (3%)
Frame = +3
Query: 114 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 281
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 282 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLV 455
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 456 GILPSGLLLXTGPFAFNSCPLRRIPXRYVIGTSTXISLGNFKLPKHFXD 602
L SGLLL TGP N PLRR ++VI TST I + N K+PKH D
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTD 214
>BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 145 bits (352), Expect = 9e-35
Identities = 76/169 (44%), Positives = 101/169 (59%), Gaps = 6/169 (3%)
Frame = +3
Query: 114 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 281
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 282 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLV 455
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 456 GILPSGLLLXTGPFAFNSCPLRRIPXRYVIGTSTXISLGNFKLPKHFXD 602
L SGLLL TGP N PLRR ++VI TST I + N K+PKH D
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTD 214
>BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 145 bits (352), Expect = 9e-35
Identities = 76/169 (44%), Positives = 101/169 (59%), Gaps = 6/169 (3%)
Frame = +3
Query: 114 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 281
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 282 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLV 455
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 456 GILPSGLLLXTGPFAFNSCPLRRIPXRYVIGTSTXISLGNFKLPKHFXD 602
L SGLLL TGP N PLRR ++VI TST I + N K+PKH D
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTD 214
>BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 145 bits (352), Expect = 9e-35
Identities = 76/169 (44%), Positives = 101/169 (59%), Gaps = 6/169 (3%)
Frame = +3
Query: 114 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 281
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 282 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLV 455
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 456 GILPSGLLLXTGPFAFNSCPLRRIPXRYVIGTSTXISLGNFKLPKHFXD 602
L SGLLL TGP N PLRR ++VI TST I + N K+PKH D
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTD 214
>BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 145 bits (352), Expect = 9e-35
Identities = 76/169 (44%), Positives = 101/169 (59%), Gaps = 6/169 (3%)
Frame = +3
Query: 114 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 281
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 282 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLV 455
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 456 GILPSGLLLXTGPFAFNSCPLRRIPXRYVIGTSTXISLGNFKLPKHFXD 602
L SGLLL TGP N PLRR ++VI TST I + N K+PKH D
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTD 214
>AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 145 bits (352), Expect = 9e-35
Identities = 76/169 (44%), Positives = 101/169 (59%), Gaps = 6/169 (3%)
Frame = +3
Query: 114 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 281
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 282 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLV 455
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 456 GILPSGLLLXTGPFAFNSCPLRRIPXRYVIGTSTXISLGNFKLPKHFXD 602
L SGLLL TGP N PLRR ++VI TST I + N K+PKH D
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTD 214
>AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 289
Score = 136 bits (328), Expect = 7e-32
Identities = 74/170 (43%), Positives = 99/170 (58%), Gaps = 7/170 (4%)
Frame = +3
Query: 114 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 281
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 282 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKR-VVL 452
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GR GK VV
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRRRGKNWVVF 165
Query: 453 VGILPSGLLLXTGPFAFNSCPLRRIPXRYVIGTSTXISLGNFKLPKHFXD 602
+ L SGLLL TGP N PLRR ++VI TST I + N K+PKH D
Sbjct: 166 LKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTD 215
>X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 125 bits (302), Expect = 1e-28
Identities = 66/157 (42%), Positives = 91/157 (57%), Gaps = 2/157 (1%)
Frame = +3
Query: 138 VMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYP 317
+ S+ M+ K KY L V K +GG+KNGGTR V L++ +YP
Sbjct: 60 ICHVSRKAMY--KRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYP 117
Query: 318 TQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLXTG 491
T++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV + L SGLLL T
Sbjct: 118 TEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTD 177
Query: 492 PFAFNSCPLRRIPXRYVIGTSTXISLGNFKLPKHFXD 602
++ PLRR ++VI TST I + N K+PKH D
Sbjct: 178 LWSSIEVPLRRTHQKFVIATSTKIDISNVKIPKHLTD 214
>S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140
product protein.
Length = 207
Score = 100 bits (239), Expect = 5e-21
Identities = 52/118 (44%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Frame = +3
Query: 147 FSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQE 326
+S+ M+ K KY L V K +GG+KNGGTR V L++ +YPT++
Sbjct: 2 YSRKAMY--KRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTED 59
Query: 327 KIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLXTGP 494
R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV + L SGLLL TGP
Sbjct: 60 VPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTGP 117
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,133,164
Number of Sequences: 237096
Number of extensions: 1858994
Number of successful extensions: 3862
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3848
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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