Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc21o20
         (597 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094831-1|AAM11184.1| 1162|Drosophila melanogaster LD41715p pro...    28   8.4  
AJ313085-1|CAC85207.1| 1162|Drosophila melanogaster eukaryotic i...    28   8.4  
AF193340-1|AAF61200.1| 1162|Drosophila melanogaster eukaryotic t...    28   8.4  
AE014297-250|AAF52028.2| 1162|Drosophila melanogaster CG2087-PA ...    28   8.4  

>AY094831-1|AAM11184.1| 1162|Drosophila melanogaster LD41715p
           protein.
          Length = 1162

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = +3

Query: 180 STSSPYTDL-KYKIDHPITLSW 242
           S S P T L KYK DHPI  +W
Sbjct: 306 SKSEPQTMLWKYKFDHPIVSAW 327


>AJ313085-1|CAC85207.1| 1162|Drosophila melanogaster eukaryotic
           initiation factor eIF-2 alpha kinase protein.
          Length = 1162

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = +3

Query: 180 STSSPYTDL-KYKIDHPITLSW 242
           S S P T L KYK DHPI  +W
Sbjct: 306 SKSEPQTMLWKYKFDHPIVSAW 327


>AF193340-1|AAF61200.1| 1162|Drosophila melanogaster eukaryotic
           translation initiationfactor 2 alpha kinase PEK protein.
          Length = 1162

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = +3

Query: 180 STSSPYTDL-KYKIDHPITLSW 242
           S S P T L KYK DHPI  +W
Sbjct: 306 SKSEPQTMLWKYKFDHPIVSAW 327


>AE014297-250|AAF52028.2| 1162|Drosophila melanogaster CG2087-PA
           protein.
          Length = 1162

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = +3

Query: 180 STSSPYTDL-KYKIDHPITLSW 242
           S S P T L KYK DHPI  +W
Sbjct: 306 SKSEPQTMLWKYKFDHPIVSAW 327


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,013,275
Number of Sequences: 53049
Number of extensions: 452612
Number of successful extensions: 903
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)