Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc21n07
         (398 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC109312-1|AAI09313.1|  637|Homo sapiens MYRIP protein protein.        30   3.3  
BC092512-1|AAH92512.1|  859|Homo sapiens myosin VIIA and Rab int...    30   3.3  
AF396687-1|AAM43954.1|  859|Homo sapiens rab effector MYRIP prot...    30   3.3  
AB083783-1|BAC15555.1|  859|Homo sapiens Slp homologue lacking C...    30   3.3  
D21205-1|BAA04747.1|  630|Homo sapiens estrogen responsive finge...    29   7.5  
BC042541-1|AAH42541.1|  630|Homo sapiens tripartite motif-contai...    29   7.5  
BC016924-1|AAH16924.1|  630|Homo sapiens tripartite motif-contai...    29   7.5  
AB208994-1|BAD92231.1|  644|Homo sapiens tripartite motif-contai...    29   7.5  

>BC109312-1|AAI09313.1|  637|Homo sapiens MYRIP protein protein.
          Length = 637

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +2

Query: 200 LLSVKNNCTNFQLDRNKKVMRIRRSYKEHVICICHKNNLIVA-NYYWFYKNSELLF 364
           L++ K  C + + +  K     ++  K  V C+C +  L+ A +  WFY N +  F
Sbjct: 74  LVNTKRQCGDCKFNVCKSCCSYQKHEKAWVCCVCQQARLLRAQSLEWFYNNVKSRF 129


>BC092512-1|AAH92512.1|  859|Homo sapiens myosin VIIA and Rab
           interacting protein protein.
          Length = 859

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +2

Query: 200 LLSVKNNCTNFQLDRNKKVMRIRRSYKEHVICICHKNNLIVA-NYYWFYKNSELLF 364
           L++ K  C + + +  K     ++  K  V C+C +  L+ A +  WFY N +  F
Sbjct: 74  LVNTKRQCGDCKFNVCKSCCSYQKHEKAWVCCVCQQARLLRAQSLEWFYNNVKSRF 129


>AF396687-1|AAM43954.1|  859|Homo sapiens rab effector MYRIP
           protein.
          Length = 859

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +2

Query: 200 LLSVKNNCTNFQLDRNKKVMRIRRSYKEHVICICHKNNLIVA-NYYWFYKNSELLF 364
           L++ K  C + + +  K     ++  K  V C+C +  L+ A +  WFY N +  F
Sbjct: 74  LVNTKRQCGDCKFNVCKSCCSYQKHEKAWVCCVCQQARLLRAQSLEWFYNNVKSRF 129


>AB083783-1|BAC15555.1|  859|Homo sapiens Slp homologue lacking C2
           domains-c protein.
          Length = 859

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +2

Query: 200 LLSVKNNCTNFQLDRNKKVMRIRRSYKEHVICICHKNNLIVA-NYYWFYKNSELLF 364
           L++ K  C + + +  K     ++  K  V C+C +  L+ A +  WFY N +  F
Sbjct: 74  LVNTKRQCGDCKFNVCKSCCSYQKHEKAWVCCVCQQARLLRAQSLEWFYNNVKSRF 129


>D21205-1|BAA04747.1|  630|Homo sapiens estrogen responsive finger
           protein protein.
          Length = 630

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = -3

Query: 207 LKSFYCSTHRDIMYYVISMVVPYYTTHIRREISEC 103
           L++F   +  +++ Y I +++ Y T H +  +SEC
Sbjct: 441 LETFLAKSRPELLEYYIKVILDYNTAHNKVALSEC 475


>BC042541-1|AAH42541.1|  630|Homo sapiens tripartite
           motif-containing 25 protein.
          Length = 630

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = -3

Query: 207 LKSFYCSTHRDIMYYVISMVVPYYTTHIRREISEC 103
           L++F   +  +++ Y I +++ Y T H +  +SEC
Sbjct: 441 LETFLAKSRPELLEYYIKVILDYNTAHNKVALSEC 475


>BC016924-1|AAH16924.1|  630|Homo sapiens tripartite
           motif-containing 25 protein.
          Length = 630

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = -3

Query: 207 LKSFYCSTHRDIMYYVISMVVPYYTTHIRREISEC 103
           L++F   +  +++ Y I +++ Y T H +  +SEC
Sbjct: 441 LETFLAKSRPELLEYYIKVILDYNTAHNKVALSEC 475


>AB208994-1|BAD92231.1|  644|Homo sapiens tripartite
           motif-containing 25 variant protein.
          Length = 644

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = -3

Query: 207 LKSFYCSTHRDIMYYVISMVVPYYTTHIRREISEC 103
           L++F   +  +++ Y I +++ Y T H +  +SEC
Sbjct: 455 LETFLAKSRPELLEYYIKVILDYNTAHNKVALSEC 489


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,111,752
Number of Sequences: 237096
Number of extensions: 1073677
Number of successful extensions: 5084
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5084
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)