Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc21n07
         (398 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024281-1|ABC86343.1|  271|Drosophila melanogaster IP14069p pro...    29   2.3  
AY069758-1|AAL39903.1|  742|Drosophila melanogaster RE01016p pro...    29   2.3  
AE014297-4488|AAF56975.2|  742|Drosophila melanogaster CG31040-P...    29   2.3  

>BT024281-1|ABC86343.1|  271|Drosophila melanogaster IP14069p
           protein.
          Length = 271

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -3

Query: 228 FVQLFLTLKSFYCSTHRDIMYYVISMVVPYYTTHIRREISE 106
           F Q++ TLKS +  TH DI   ++   +  +  HIR  + +
Sbjct: 76  FPQIYATLKSHFADTH-DITLNILLQPIETHLAHIRPPVQD 115


>AY069758-1|AAL39903.1|  742|Drosophila melanogaster RE01016p
           protein.
          Length = 742

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -3

Query: 228 FVQLFLTLKSFYCSTHRDIMYYVISMVVPYYTTHIRREISE 106
           F Q++ TLKS +  TH DI   ++   +  +  HIR  + +
Sbjct: 547 FPQIYATLKSHFADTH-DITLNILLQPIETHLAHIRPPVQD 586


>AE014297-4488|AAF56975.2|  742|Drosophila melanogaster CG31040-PA
           protein.
          Length = 742

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -3

Query: 228 FVQLFLTLKSFYCSTHRDIMYYVISMVVPYYTTHIRREISE 106
           F Q++ TLKS +  TH DI   ++   +  +  HIR  + +
Sbjct: 547 FPQIYATLKSHFADTH-DITLNILLQPIETHLAHIRPPVQD 586


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,803,635
Number of Sequences: 53049
Number of extensions: 325495
Number of successful extensions: 600
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 600
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)