Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc21n06
         (105 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022527-1|AAY54943.1|  307|Drosophila melanogaster IP07888p pro...    28   1.5  
AY071246-1|AAL48868.1|  165|Drosophila melanogaster RE28824p pro...    28   1.5  
AE013599-3797|AAF47152.1|  165|Drosophila melanogaster CG3195-PC...    28   1.5  
AE013599-3796|AAM68299.1|  165|Drosophila melanogaster CG3195-PB...    28   1.5  
AE013599-3795|AAM68298.1|  165|Drosophila melanogaster CG3195-PA...    28   1.5  
BT010060-1|AAQ22529.1|  951|Drosophila melanogaster LD15833p pro...    27   2.6  
AF106932-1|AAD09425.1| 1945|Drosophila melanogaster plexin A pro...    27   2.6  
AE014135-165|AAN06564.1| 1505|Drosophila melanogaster CG11081-PC...    27   2.6  
AE014135-164|AAN06563.1| 1505|Drosophila melanogaster CG11081-PB...    27   2.6  
AE014135-163|AAN06565.2| 1945|Drosophila melanogaster CG11081-PD...    27   2.6  
AE014135-162|AAF59394.1| 1945|Drosophila melanogaster CG11081-PA...    27   2.6  

>BT022527-1|AAY54943.1|  307|Drosophila melanogaster IP07888p
           protein.
          Length = 307

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +3

Query: 60  IVDILKEPPRDRKKK 104
           I+  LKEPPRDRKK+
Sbjct: 223 IIKALKEPPRDRKKQ 237


>AY071246-1|AAL48868.1|  165|Drosophila melanogaster RE28824p
           protein.
          Length = 165

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +3

Query: 60  IVDILKEPPRDRKKK 104
           I+  LKEPPRDRKK+
Sbjct: 81  IIKALKEPPRDRKKQ 95


>AE013599-3797|AAF47152.1|  165|Drosophila melanogaster CG3195-PC,
           isoform C protein.
          Length = 165

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +3

Query: 60  IVDILKEPPRDRKKK 104
           I+  LKEPPRDRKK+
Sbjct: 81  IIKALKEPPRDRKKQ 95


>AE013599-3796|AAM68299.1|  165|Drosophila melanogaster CG3195-PB,
           isoform B protein.
          Length = 165

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +3

Query: 60  IVDILKEPPRDRKKK 104
           I+  LKEPPRDRKK+
Sbjct: 81  IIKALKEPPRDRKKQ 95


>AE013599-3795|AAM68298.1|  165|Drosophila melanogaster CG3195-PA,
           isoform A protein.
          Length = 165

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +3

Query: 60  IVDILKEPPRDRKKK 104
           I+  LKEPPRDRKK+
Sbjct: 81  IIKALKEPPRDRKKQ 95


>BT010060-1|AAQ22529.1|  951|Drosophila melanogaster LD15833p
           protein.
          Length = 951

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 16  FAVACRFICDFNFNGLLTFLRSLLV 90
           F V  RF+C FN  G +T L + L+
Sbjct: 320 FIVQTRFVCQFNIEGRVTSLNAQLL 344


>AF106932-1|AAD09425.1| 1945|Drosophila melanogaster plexin A
           protein.
          Length = 1945

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 16  FAVACRFICDFNFNGLLTFLRSLLV 90
           F V  RF+C FN  G +T L + L+
Sbjct: 760 FIVQTRFVCQFNIEGRVTSLNAQLL 784


>AE014135-165|AAN06564.1| 1505|Drosophila melanogaster CG11081-PC,
           isoform C protein.
          Length = 1505

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 16  FAVACRFICDFNFNGLLTFLRSLLV 90
           F V  RF+C FN  G +T L + L+
Sbjct: 320 FIVQTRFVCQFNIEGRVTSLNAQLL 344


>AE014135-164|AAN06563.1| 1505|Drosophila melanogaster CG11081-PB,
           isoform B protein.
          Length = 1505

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 16  FAVACRFICDFNFNGLLTFLRSLLV 90
           F V  RF+C FN  G +T L + L+
Sbjct: 320 FIVQTRFVCQFNIEGRVTSLNAQLL 344


>AE014135-163|AAN06565.2| 1945|Drosophila melanogaster CG11081-PD,
           isoform D protein.
          Length = 1945

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 16  FAVACRFICDFNFNGLLTFLRSLLV 90
           F V  RF+C FN  G +T L + L+
Sbjct: 760 FIVQTRFVCQFNIEGRVTSLNAQLL 784


>AE014135-162|AAF59394.1| 1945|Drosophila melanogaster CG11081-PA,
           isoform A protein.
          Length = 1945

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 16  FAVACRFICDFNFNGLLTFLRSLLV 90
           F V  RF+C FN  G +T L + L+
Sbjct: 760 FIVQTRFVCQFNIEGRVTSLNAQLL 784


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,977,287
Number of Sequences: 53049
Number of extensions: 32062
Number of successful extensions: 130
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 130
length of database: 24,988,368
effective HSP length: 16
effective length of database: 24,139,584
effective search space used: 434512512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)