Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc21m19
         (524 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           25   1.6  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           25   1.6  
AY748835-1|AAV28183.1|   50|Anopheles gambiae cytochrome P450 pr...    24   2.7  
DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       23   8.3  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   8.3  

>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +1

Query: 397 THPPTWTCNSFA*NLWTKPQNSICVRGQPKSFTYTFTTIW 516
           T  P WT  +     W+ P  +     QP+  T T TT+W
Sbjct: 154 TTTPIWTDPT----TWSAPTTTTTWSDQPRPPTTTTTTVW 189


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +1

Query: 397 THPPTWTCNSFA*NLWTKPQNSICVRGQPKSFTYTFTTIW 516
           T  P WT  +     W+ P  +     QP+  T T TT+W
Sbjct: 154 TTTPIWTDPT----TWSAPTTTTTWSDQPRPPTTTTTTVW 189


>AY748835-1|AAV28183.1|   50|Anopheles gambiae cytochrome P450
           protein.
          Length = 50

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +3

Query: 366 EVQQLIEWAINASPDMDLQQFRIEFMDKTTELNLRSWPAQ 485
           E+QQ+ E     S   D  Q  + ++D      LR WP+Q
Sbjct: 11  EIQQVSESLDGKSITYDALQ-SMRYLDMVVSETLRKWPSQ 49


>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = -3

Query: 171 RSCCICVR--RRPQRRCTLAPTRTPTSLLFISKILQNVLRTTN 49
           ++C  C+   RR +RR    P++     +F++++L  V  T N
Sbjct: 319 KTCVCCIESFRRRRRRDAFTPSKDDP--IFVNEMLHKVDLTVN 359


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = +3

Query: 264 RASKSAHLTKLLSSQATYLYHFACLMKYKDIQKYEVQQLIE 386
           RASK+    KLL+S +  +  +A  +  K++QK E  +L+E
Sbjct: 772 RASKA----KLLASVSESVMRYAAPVWSKELQKREPGRLLE 808


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 565,020
Number of Sequences: 2352
Number of extensions: 11105
Number of successful extensions: 25
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48205926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)