Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc21m15
         (652 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    56   2e-10
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    49   5e-08
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    49   5e-08
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    49   5e-08
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    44   2e-06
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    41   9e-06
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                37   1e-04
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    24   1.5  
DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex det...    24   1.5  
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    24   1.5  
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    24   1.5  
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    24   1.5  
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    24   1.5  
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    24   1.5  
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    24   1.5  
DQ069332-1|AAZ32217.1|  296|Apis mellifera RNA polymerase II lar...    23   3.4  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    22   4.5  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   4.5  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   4.5  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 56.4 bits (130), Expect = 2e-10
 Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
 Frame = +3

Query: 312 DLFETLQIKGELSHQLVSNIIRQLCEALNDLHKHNFIHNDIKLENVLYFEALDRVYVCDY 491
           +L+  L+ KG             + EA + LH  N I+ D+K EN+L  ++   V + D+
Sbjct: 452 ELWTVLRDKGHFDDGTTRFYTACVVEAFDYLHSRNIIYRDLKPENLL-LDSQGYVKLVDF 510

Query: 492 GLCK---HENLPSVHDGTLEYFSPEKIRRHNYARSFDWYAVGVLTYKLLTG 635
           G  K   H        GT EY +PE I    +  S D++++GVL ++LLTG
Sbjct: 511 GFAKRLDHGRKTWTFCGTPEYVAPEVILNKGHDISADYWSLGVLMFELLTG 561


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 48.8 bits (111), Expect = 5e-08
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
 Frame = +3

Query: 369 IIRQLCEALNDLHKHNFIHNDIKLENVLYFEALDRVYVCDYGLCKHE--NLPSVHDGTLE 542
           I   + E +  LH    +H D+KL+NVL  +  +R  + D+G C  E   L S+  GT  
Sbjct: 702 IALDVLEGIRYLHSQGLVHRDVKLKNVL-LDIENRAKLTDFGFCITEVMMLGSI-VGTPV 759

Query: 543 YFSPEKIRRHNYARSFDWYAVGVLTYKLLTG 635
           + +PE +  H Y  S D YA G+L + L  G
Sbjct: 760 HMAPELLSGH-YDSSVDVYAFGILFWYLCAG 789


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
            isoform A protein.
          Length = 969

 Score = 48.8 bits (111), Expect = 5e-08
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
 Frame = +3

Query: 369  IIRQLCEALNDLHKHNFIHNDIKLENVLYFEALDRVYVCDYGLCKHE--NLPSVHDGTLE 542
            I   + E +  LH    +H D+KL+NVL  +  +R  + D+G C  E   L S+  GT  
Sbjct: 740  IALDVLEGIRYLHSQGLVHRDVKLKNVL-LDIENRAKLTDFGFCITEVMMLGSI-VGTPV 797

Query: 543  YFSPEKIRRHNYARSFDWYAVGVLTYKLLTG 635
            + +PE +  H Y  S D YA G+L + L  G
Sbjct: 798  HMAPELLSGH-YDSSVDVYAFGILFWYLCAG 827


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 48.8 bits (111), Expect = 5e-08
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
 Frame = +3

Query: 363 SNIIRQLCEALNDLHKHNFIHNDIKLENVLYFEALD--RVYVCDYGLCKHENLPSV---- 524
           S+ I+Q+ E+++  H +  +H D+K EN+L         V + D+GL       +     
Sbjct: 12  SHCIQQILESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEAQAWFG 71

Query: 525 HDGTLEYFSPEKIRRHNYARSFDWYAVGVLTYKLLTG 635
             GT  Y SPE +++  Y +  D +A GV+ Y LL G
Sbjct: 72  FAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVG 108


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 43.6 bits (98), Expect = 2e-06
 Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
 Frame = +3

Query: 129 ILSHKPTSKLY----LQKTISAHNFNVD----EIKVHQLMNDHPNFIKIYFNHGFINNQV 284
           +   K T +LY    L+K I   + +V+    E +V  L    P  ++++     ++   
Sbjct: 2   LAERKGTDELYAIKILKKDIIIQDDDVECTMVEKRVLALSTKPPFLVQLHSCFQTMDRLY 61

Query: 285 IVMDYIDCPDLFETLQIKGELSHQLVSNIIRQLCEALNDLHKHNFIHNDIKLENVLYFEA 464
            VM+Y++  DL   +Q  G+    +      ++   L  LH    ++ D+KL+NVL  + 
Sbjct: 62  FVMEYVNGGDLMYQIQQCGKFKEPVAVFYASEIAIGLFFLHGRGIVYRDLKLDNVL-LDQ 120

Query: 465 LDRVYVCDYGLCK 503
              + + D+G+CK
Sbjct: 121 DGHIKIADFGMCK 133


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 41.1 bits (92), Expect = 9e-06
 Identities = 31/149 (20%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
 Frame = +3

Query: 228  DHPNFIKIYFNHGFINNQVIVMDYIDCPDLFETLQIK-GELSHQLVSNIIRQLCEALNDL 404
            +HPN I +       N  +I+ ++++   L   L+   G+     +  ++R +   +  L
Sbjct: 692  EHPNVIFLQGVVTKSNPVMIITEFMENGSLDTFLRANDGKFQVLQLVGMLRGIASGMQYL 751

Query: 405  HKHNFIHNDIKLENVLYFEALDRVYVCDYGLCKH-----ENLPSVHDGTL--EYFSPEKI 563
             + N++H D+   NVL   AL    + D+GL +      E   +   G +   + +PE I
Sbjct: 752  AEMNYVHRDLAARNVLVNAAL-VCKIADFGLSREIESATEGAYTTRGGKIPVRWTAPEAI 810

Query: 564  RRHNYARSFDWYAVGVLTYKLLTGGRHPF 650
                +  + D +++G++ +++++ G  P+
Sbjct: 811  AFRKFTSASDVWSMGIVCWEVMSYGERPY 839


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 37.1 bits (82), Expect = 1e-04
 Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
 Frame = +3

Query: 369 IIRQLCEALNDLHKHNFIHNDIKLENVLYFEALDRVYVCDYGLCKHENLPSVHD---GTL 539
           I++ +  AL   H    +H D+K +N+L      +  + D+G       P+  D   GT 
Sbjct: 160 ILKSITCALQFCHNAGIVHADVKPKNIL-MSKNGQPKLTDFGSSVLIGAPNEIDKFYGTP 218

Query: 540 EYFSPEKIRRHNYARSFDWYAVGVLTYKLL 629
            Y +PE I+++    + D Y++G++ +++L
Sbjct: 219 GYTAPEVIKQNRPTPAADIYSLGIVAWQML 248


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = +3

Query: 180 AHNFNVDEIKVHQLMNDHPNFIKIYFNHGFI 272
           ++N+N      +   N++ N+ K+Y+N  +I
Sbjct: 86  SNNYNYSNYNNYNNNNNYNNYKKLYYNINYI 116


>DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = +3

Query: 180 AHNFNVDEIKVHQLMNDHPNFIKIYFNHGFI 272
           ++N+N      +   N++ N+ K+Y+N  +I
Sbjct: 86  SNNYNYSNYNNYNNNNNYNNYKKLYYNINYI 116


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = +3

Query: 180 AHNFNVDEIKVHQLMNDHPNFIKIYFNHGFI 272
           ++N+N      +   N++ N+ K+Y+N  +I
Sbjct: 86  SNNYNYSNYNNYNNNNNYNNYKKLYYNINYI 116


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = +3

Query: 180 AHNFNVDEIKVHQLMNDHPNFIKIYFNHGFI 272
           ++N+N      +   N++ N+ K+Y+N  +I
Sbjct: 86  SNNYNYSNYNNYNNNNNYNNYKKLYYNINYI 116


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = +3

Query: 180 AHNFNVDEIKVHQLMNDHPNFIKIYFNHGFI 272
           ++N+N      +   N++ N+ K+Y+N  +I
Sbjct: 86  SNNYNYSNYNNYNNNNNYNNYKKLYYNINYI 116


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = +3

Query: 180 AHNFNVDEIKVHQLMNDHPNFIKIYFNHGFI 272
           ++N+N      +   N++ N+ K+Y+N  +I
Sbjct: 86  SNNYNYSNYNNYNNNNNYNNYKKLYYNINYI 116


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = +3

Query: 180 AHNFNVDEIKVHQLMNDHPNFIKIYFNHGFI 272
           ++N+N      +   N++ N+ K+Y+N  +I
Sbjct: 86  SNNYNYSNYNNYNNNNNYNNYKKLYYNINYI 116


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = +3

Query: 180 AHNFNVDEIKVHQLMNDHPNFIKIYFNHGFI 272
           ++N+N      +   N++ N+ K+Y+N  +I
Sbjct: 86  SNNYNYSNYNNYNNNNNYNNYKKLYYNINYI 116


>DQ069332-1|AAZ32217.1|  296|Apis mellifera RNA polymerase II large
           subunit protein.
          Length = 296

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
 Frame = +3

Query: 57  QFYENCKNVKTRYKIINGRFGKISILSHKPTSKLYLQKTISAHNFNVDEI--KVHQL 221
           +FY N + V   + ++ G    I      P + L +QK I     +V E+  K H +
Sbjct: 128 RFYGNIQTVXNNWLLLEGHSIGIGDTIADPQTYLEIQKXIKKAKEDVIEVIQKAHNM 184


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +3

Query: 63  YENCKNVKTRYKIINGRFGKISIL 134
           YE+C  + + +KI   +F ++ +L
Sbjct: 121 YEDCSGIVSAFKIAVDKFDRLWVL 144


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +2

Query: 11  HGHHHRHKCYAANAGTILRKLQKR 82
           H HH  H     ++G +  + QKR
Sbjct: 280 HVHHANHHAILGHSGFLCERHQKR 303


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
 Frame = -1

Query: 607 PTAYQSNERA*LWRRI--FSGLKYSNVPSCTLGKFS 506
           P+ Y    R  L   +  F   KYSNVP    G F+
Sbjct: 195 PSVYSKTRRRALEHTLDRFHNDKYSNVPYFLFGDFN 230


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,976
Number of Sequences: 438
Number of extensions: 3829
Number of successful extensions: 22
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)