Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc21m06
         (525 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118616-1|AAM49985.1|  254|Drosophila melanogaster LP10960p pro...    28   8.9  
AF077304-1|AAD03844.1|  254|Drosophila melanogaster antigen 5-re...    28   8.9  
AE014298-2051|AAF48386.1|  254|Drosophila melanogaster CG9540-PA...    28   8.9  

>AY118616-1|AAM49985.1|  254|Drosophila melanogaster LP10960p
           protein.
          Length = 254

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 9/36 (25%), Positives = 20/36 (55%)
 Frame = +3

Query: 183 HVSWNVWNGDXGDIXYVFFDEQQVWKGDADSKRATI 290
           +++W  ++GD  D+ Y+  +  Q+W  +  +  A I
Sbjct: 126 NLAWQAYSGDLPDMGYILDNSVQMWFDEVHNSNAGI 161


>AF077304-1|AAD03844.1|  254|Drosophila melanogaster antigen
           5-related 2 protein.
          Length = 254

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 9/36 (25%), Positives = 20/36 (55%)
 Frame = +3

Query: 183 HVSWNVWNGDXGDIXYVFFDEQQVWKGDADSKRATI 290
           +++W  ++GD  D+ Y+  +  Q+W  +  +  A I
Sbjct: 126 NLAWQAYSGDLPDMGYILDNSVQMWFDEVHNSNAGI 161


>AE014298-2051|AAF48386.1|  254|Drosophila melanogaster CG9540-PA
           protein.
          Length = 254

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 9/36 (25%), Positives = 20/36 (55%)
 Frame = +3

Query: 183 HVSWNVWNGDXGDIXYVFFDEQQVWKGDADSKRATI 290
           +++W  ++GD  D+ Y+  +  Q+W  +  +  A I
Sbjct: 126 NLAWQAYSGDLPDMGYILDNSVQMWFDEVHNSNAGI 161


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,196,587
Number of Sequences: 53049
Number of extensions: 417037
Number of successful extensions: 991
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1949978112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)