Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc21m06
         (525 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   1.4  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   1.4  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   1.4  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   3.3  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 165 KEQVDVHVSWNVWN 206
           K+ V V+ SWN WN
Sbjct: 687 KDLVSVNKSWNKWN 700


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 165 KEQVDVHVSWNVWN 206
           K+ V V+ SWN WN
Sbjct: 687 KDLVSVNKSWNKWN 700


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 165 KEQVDVHVSWNVWN 206
           K+ V V+ SWN WN
Sbjct: 687 KDLVSVNKSWNKWN 700


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = +2

Query: 395 NVLKMEIFIGPTMAITFPTPRAAMLTNHVYYKYRALD 505
           +++ +E+ + P +A+T+      M+ N   YKY   D
Sbjct: 375 HMIMLEMIL-PGVAVTYYGEEIGMVDNTTIYKYDVRD 410


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,207
Number of Sequences: 438
Number of extensions: 2942
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14722920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)