Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc21m04
         (448 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1934|AAF48296.2| 1384|Drosophila melanogaster CG2691-PA...    31   0.93 
M28863-1|AAA62770.1|  543|Drosophila melanogaster seven-up prote...    29   2.8  
AY129452-1|AAM76194.1|  543|Drosophila melanogaster RE08410p pro...    29   2.8  
AE014297-1474|AAN13541.1|  746|Drosophila melanogaster CG11502-P...    29   2.8  
AE014297-1473|AAF54773.1|  543|Drosophila melanogaster CG11502-P...    29   2.8  
D43795-1|BAA07853.1|  519|Drosophila melanogaster CP-1 protein.        28   5.0  

>AE014298-1934|AAF48296.2| 1384|Drosophila melanogaster CG2691-PA
           protein.
          Length = 1384

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = -3

Query: 122 NS*VINHCYYTFKPEDTVNKQNETIHTTSLLAFPLKSFK 6
           +S V   C   FKPE   N Q   +HT  LL   L  FK
Sbjct: 318 SSRVAKFCLAQFKPEVLANAQTTVLHTLELLKDTLYGFK 356


>M28863-1|AAA62770.1|  543|Drosophila melanogaster seven-up protein
           type 1 protein.
          Length = 543

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 271 ARGHHSGAAAGVPRGVRSGQEGLVLPL 351
           A GHHSG+ +G   GV  G    +LPL
Sbjct: 124 AGGHHSGSGSGSGSGVNPGHGSDMLPL 150


>AY129452-1|AAM76194.1|  543|Drosophila melanogaster RE08410p
           protein.
          Length = 543

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 271 ARGHHSGAAAGVPRGVRSGQEGLVLPL 351
           A GHHSG+ +G   GV  G    +LPL
Sbjct: 124 AGGHHSGSGSGSGSGVNPGHGSDMLPL 150


>AE014297-1474|AAN13541.1|  746|Drosophila melanogaster CG11502-PA,
           isoform A protein.
          Length = 746

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 271 ARGHHSGAAAGVPRGVRSGQEGLVLPL 351
           A GHHSG+ +G   GV  G    +LPL
Sbjct: 124 AGGHHSGSGSGSGSGVNPGHGSDMLPL 150


>AE014297-1473|AAF54773.1|  543|Drosophila melanogaster CG11502-PB,
           isoform B protein.
          Length = 543

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 271 ARGHHSGAAAGVPRGVRSGQEGLVLPL 351
           A GHHSG+ +G   GV  G    +LPL
Sbjct: 124 AGGHHSGSGSGSGSGVNPGHGSDMLPL 150


>D43795-1|BAA07853.1|  519|Drosophila melanogaster CP-1 protein.
          Length = 519

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 331 PGRYVHREARQQQRRYDVHEPTLVPRIQQ 245
           PGRY  ++ +QQQ+RY   +  L  + QQ
Sbjct: 176 PGRYERQQQQQQQQRYQQQQQQLRQQHQQ 204


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,957,591
Number of Sequences: 53049
Number of extensions: 312709
Number of successful extensions: 1027
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1435027293
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)