Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc21l23
(511 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC036884-1|AAH36884.1| 884|Homo sapiens ZNF462 protein protein. 31 2.3
AL512593-2|CAI14942.1| 931|Homo sapiens zinc finger protein 462... 31 2.3
AL512593-1|CAI14941.1| 1411|Homo sapiens zinc finger protein 462... 31 2.3
AB058706-1|BAB47432.2| 1412|Homo sapiens KIAA1803 protein protein. 31 2.3
U52682-1|AAC50779.1| 450|Homo sapiens lymphocyte specific inter... 30 5.4
D78261-1|BAA11335.1| 440|Homo sapiens ICSAT transcription facto... 30 5.4
BC015752-1|AAH15752.1| 451|Homo sapiens interferon regulatory f... 30 5.4
AL589962-1|CAH71554.1| 451|Homo sapiens interferon regulatory f... 30 5.4
AL365272-3|CAH72537.1| 451|Homo sapiens interferon regulatory f... 30 5.4
BC023569-1|AAH23569.1| 443|Homo sapiens UPF3 regulator of nonse... 29 9.4
BC008694-1|AAH08694.1| 151|Homo sapiens UPF3A protein protein. 29 9.4
AY013250-1|AAG48510.1| 476|Homo sapiens hUPF3A protein. 29 9.4
AL160396-6|CAM22288.1| 443|Homo sapiens UPF3 regulator of nonse... 29 9.4
AL160396-5|CAI15816.1| 476|Homo sapiens UPF3 regulator of nonse... 29 9.4
AF318575-1|AAG60690.1| 452|Homo sapiens UPF3 protein. 29 9.4
>BC036884-1|AAH36884.1| 884|Homo sapiens ZNF462 protein protein.
Length = 884
Score = 31.1 bits (67), Expect = 2.3
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 50 KRKIGDSSSDDNQPKRERVESGEDQQLVPYNNNNGAAFNVK 172
K K+ SSSDD + E ED++L+ + +++GAA N +
Sbjct: 750 KEKMESSSSDDEDKEEEMNSKAEDRELMRF-SDHGAALNTE 789
>AL512593-2|CAI14942.1| 931|Homo sapiens zinc finger protein 462
protein.
Length = 931
Score = 31.1 bits (67), Expect = 2.3
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 50 KRKIGDSSSDDNQPKRERVESGEDQQLVPYNNNNGAAFNVK 172
K K+ SSSDD + E ED++L+ + +++GAA N +
Sbjct: 797 KEKMESSSSDDEDKEEEMNSKAEDRELMRF-SDHGAALNTE 836
>AL512593-1|CAI14941.1| 1411|Homo sapiens zinc finger protein 462
protein.
Length = 1411
Score = 31.1 bits (67), Expect = 2.3
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 50 KRKIGDSSSDDNQPKRERVESGEDQQLVPYNNNNGAAFNVK 172
K K+ SSSDD + E ED++L+ + +++GAA N +
Sbjct: 1277 KEKMESSSSDDEDKEEEMNSKAEDRELMRF-SDHGAALNTE 1316
>AB058706-1|BAB47432.2| 1412|Homo sapiens KIAA1803 protein protein.
Length = 1412
Score = 31.1 bits (67), Expect = 2.3
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 50 KRKIGDSSSDDNQPKRERVESGEDQQLVPYNNNNGAAFNVK 172
K K+ SSSDD + E ED++L+ + +++GAA N +
Sbjct: 1278 KEKMESSSSDDEDKEEEMNSKAEDRELMRF-SDHGAALNTE 1317
>U52682-1|AAC50779.1| 450|Homo sapiens lymphocyte specific
interferon regulatory factor/interferon regulatory
factor 4 protein.
Length = 450
Score = 29.9 bits (64), Expect = 5.4
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +2
Query: 110 SGEDQQLVPYNNNNGAAFNVK----HDETGVMCYFTPSSVQLEPRELTKMLWQEQMAINV 277
S DQ L PY +NG N++ H E GV+ + P + + +++ W +A+
Sbjct: 284 SNLDQVLFPYPEDNGQRKNIEKLLSHLERGVVLWMAPDGLYAKRLCQSRIYWDGPLALCN 343
Query: 278 KRGN 289
R N
Sbjct: 344 DRPN 347
>D78261-1|BAA11335.1| 440|Homo sapiens ICSAT transcription factor
protein.
Length = 440
Score = 29.9 bits (64), Expect = 5.4
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +2
Query: 110 SGEDQQLVPYNNNNGAAFNVK----HDETGVMCYFTPSSVQLEPRELTKMLWQEQMAINV 277
S DQ L PY +NG N++ H E GV+ + P + + +++ W +A+
Sbjct: 315 SNLDQVLFPYPEDNGQRKNIEKLLSHLERGVVLWMAPDGLYAKRLCQSRIYWDGPLALCN 374
Query: 278 KRGN 289
R N
Sbjct: 375 DRPN 378
>BC015752-1|AAH15752.1| 451|Homo sapiens interferon regulatory
factor 4 protein.
Length = 451
Score = 29.9 bits (64), Expect = 5.4
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +2
Query: 110 SGEDQQLVPYNNNNGAAFNVK----HDETGVMCYFTPSSVQLEPRELTKMLWQEQMAINV 277
S DQ L PY +NG N++ H E GV+ + P + + +++ W +A+
Sbjct: 285 SNLDQVLFPYPEDNGQRKNIEKLLSHLERGVVLWMAPDGLYAKRLCQSRIYWDGPLALCN 344
Query: 278 KRGN 289
R N
Sbjct: 345 DRPN 348
>AL589962-1|CAH71554.1| 451|Homo sapiens interferon regulatory
factor 4 protein.
Length = 451
Score = 29.9 bits (64), Expect = 5.4
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +2
Query: 110 SGEDQQLVPYNNNNGAAFNVK----HDETGVMCYFTPSSVQLEPRELTKMLWQEQMAINV 277
S DQ L PY +NG N++ H E GV+ + P + + +++ W +A+
Sbjct: 285 SNLDQVLFPYPEDNGQRKNIEKLLSHLERGVVLWMAPDGLYAKRLCQSRIYWDGPLALCN 344
Query: 278 KRGN 289
R N
Sbjct: 345 DRPN 348
>AL365272-3|CAH72537.1| 451|Homo sapiens interferon regulatory
factor 4 protein.
Length = 451
Score = 29.9 bits (64), Expect = 5.4
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +2
Query: 110 SGEDQQLVPYNNNNGAAFNVK----HDETGVMCYFTPSSVQLEPRELTKMLWQEQMAINV 277
S DQ L PY +NG N++ H E GV+ + P + + +++ W +A+
Sbjct: 285 SNLDQVLFPYPEDNGQRKNIEKLLSHLERGVVLWMAPDGLYAKRLCQSRIYWDGPLALCN 344
Query: 278 KRGN 289
R N
Sbjct: 345 DRPN 348
>BC023569-1|AAH23569.1| 443|Homo sapiens UPF3 regulator of nonsense
transcripts homolog A (yeast) protein.
Length = 443
Score = 29.1 bits (62), Expect = 9.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 11 EPQQTAHVGSMATKRKIGDSSSDDNQPKRERVESG 115
EPQ+T+H GS R + S +++ +R V+ G
Sbjct: 299 EPQETSHSGSDKEHRDVERSQEQESEAQRYHVDDG 333
>BC008694-1|AAH08694.1| 151|Homo sapiens UPF3A protein protein.
Length = 151
Score = 29.1 bits (62), Expect = 9.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 11 EPQQTAHVGSMATKRKIGDSSSDDNQPKRERVESG 115
EPQ+T+H GS R + S +++ +R V+ G
Sbjct: 7 EPQETSHSGSDKEHRDVERSQEQESEAQRYHVDDG 41
>AY013250-1|AAG48510.1| 476|Homo sapiens hUPF3A protein.
Length = 476
Score = 29.1 bits (62), Expect = 9.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 11 EPQQTAHVGSMATKRKIGDSSSDDNQPKRERVESG 115
EPQ+T+H GS R + S +++ +R V+ G
Sbjct: 332 EPQETSHSGSDKEHRDVERSQEQESEAQRYHVDDG 366
>AL160396-6|CAM22288.1| 443|Homo sapiens UPF3 regulator of nonsense
transcripts homolog A (yeast) protein.
Length = 443
Score = 29.1 bits (62), Expect = 9.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 11 EPQQTAHVGSMATKRKIGDSSSDDNQPKRERVESG 115
EPQ+T+H GS R + S +++ +R V+ G
Sbjct: 299 EPQETSHSGSDKEHRDVERSQEQESEAQRYHVDDG 333
>AL160396-5|CAI15816.1| 476|Homo sapiens UPF3 regulator of nonsense
transcripts homolog A (yeast) protein.
Length = 476
Score = 29.1 bits (62), Expect = 9.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 11 EPQQTAHVGSMATKRKIGDSSSDDNQPKRERVESG 115
EPQ+T+H GS R + S +++ +R V+ G
Sbjct: 332 EPQETSHSGSDKEHRDVERSQEQESEAQRYHVDDG 366
>AF318575-1|AAG60690.1| 452|Homo sapiens UPF3 protein.
Length = 452
Score = 29.1 bits (62), Expect = 9.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 11 EPQQTAHVGSMATKRKIGDSSSDDNQPKRERVESG 115
EPQ+T+H GS R + S +++ +R V+ G
Sbjct: 308 EPQETSHSGSDKEHRDVERSQEQESEAQRYHVDDG 342
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,990,925
Number of Sequences: 237096
Number of extensions: 1754138
Number of successful extensions: 4439
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4432
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4763295768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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