Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc21l18
(614 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83236-11|CAB05785.1| 489|Caenorhabditis elegans Hypothetical p... 108 4e-24
Z81468-3|CAB03876.1| 489|Caenorhabditis elegans Hypothetical pr... 108 4e-24
U32223-1|AAA74956.1| 489|Caenorhabditis elegans tRNA-guanine tr... 108 4e-24
AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical ... 40 0.002
AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical ... 40 0.002
Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p... 39 0.002
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p... 39 0.002
Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z29095-11|CAB54286.2| 426|Caenorhabditis elegans Hypothetical p... 39 0.003
AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical ... 39 0.003
U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis def... 38 0.008
Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr... 37 0.010
Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr... 37 0.010
Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr... 37 0.010
Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr... 37 0.010
U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis def... 37 0.010
AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin c-t... 37 0.010
AC091125-6|AAK27886.3| 474|Caenorhabditis elegans Hypothetical ... 36 0.017
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 35 0.053
Z47811-2|CAA87786.2| 1307|Caenorhabditis elegans Hypothetical pr... 33 0.12
AF003386-4|AAO38631.1| 452|Caenorhabditis elegans Hypothetical ... 33 0.16
AF003386-3|AAO38630.1| 499|Caenorhabditis elegans Hypothetical ... 33 0.16
U88180-7|AAB42297.2| 789|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical pr... 32 0.28
AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical... 32 0.28
Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical pr... 30 1.1
U97012-5|AAK39149.1| 515|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylat... 29 2.6
Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical pr... 28 4.6
U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related... 28 4.6
AB095019-1|BAC22611.1| 822|Caenorhabditis elegans ubiquitin-spe... 28 4.6
Z29645-1|CAA82753.1| 522|Caenorhabditis elegans kinesin light c... 28 6.1
Z29644-1|CAA82752.1| 540|Caenorhabditis elegans kinesin light c... 28 6.1
U55369-14|AAN84862.1| 540|Caenorhabditis elegans Kinesin light ... 28 6.1
U55369-13|AAN84863.1| 501|Caenorhabditis elegans Kinesin light ... 28 6.1
U55369-12|AAK52182.1| 522|Caenorhabditis elegans Kinesin light ... 28 6.1
U55369-11|AAT68902.1| 531|Caenorhabditis elegans Kinesin light ... 28 6.1
AF026212-1|AAF99971.1| 807|Caenorhabditis elegans Hypothetical ... 28 6.1
>Z83236-11|CAB05785.1| 489|Caenorhabditis elegans Hypothetical
protein C13B4.2 protein.
Length = 489
Score = 108 bits (259), Expect = 4e-24
Identities = 63/126 (50%), Positives = 78/126 (61%), Gaps = 1/126 (0%)
Frame = +2
Query: 98 VKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPERQKVVCKGVTLRDDTWGNFKLTN 277
V VKW KE Y VEV+T P++FKAQ+FALT V PERQKVV G TL DD W +
Sbjct: 4 VNVKWQKEKYV-VEVDTSAPPMVFKAQLFALTQVVPERQKVVIMGRTLGDDDWEGITIKE 62
Query: 278 NALVLVMGSKEEDVPAAP-VEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCL 454
N +++MGS E +P P V + + +AE +A+ P GL NLGNTCY N+ VQ L
Sbjct: 63 NMTIMMMGSVGE-IPKPPTVLEKKQANRDKQAEEISAL-YPCGLANLGNTCYFNSCVQML 120
Query: 455 KTVPEL 472
K V EL
Sbjct: 121 KEVNEL 126
>Z81468-3|CAB03876.1| 489|Caenorhabditis elegans Hypothetical
protein C13B4.2 protein.
Length = 489
Score = 108 bits (259), Expect = 4e-24
Identities = 63/126 (50%), Positives = 78/126 (61%), Gaps = 1/126 (0%)
Frame = +2
Query: 98 VKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPERQKVVCKGVTLRDDTWGNFKLTN 277
V VKW KE Y VEV+T P++FKAQ+FALT V PERQKVV G TL DD W +
Sbjct: 4 VNVKWQKEKYV-VEVDTSAPPMVFKAQLFALTQVVPERQKVVIMGRTLGDDDWEGITIKE 62
Query: 278 NALVLVMGSKEEDVPAAP-VEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCL 454
N +++MGS E +P P V + + +AE +A+ P GL NLGNTCY N+ VQ L
Sbjct: 63 NMTIMMMGSVGE-IPKPPTVLEKKQANRDKQAEEISAL-YPCGLANLGNTCYFNSCVQML 120
Query: 455 KTVPEL 472
K V EL
Sbjct: 121 KEVNEL 126
>U32223-1|AAA74956.1| 489|Caenorhabditis elegans tRNA-guanine
transglycosylase protein.
Length = 489
Score = 108 bits (259), Expect = 4e-24
Identities = 63/126 (50%), Positives = 78/126 (61%), Gaps = 1/126 (0%)
Frame = +2
Query: 98 VKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPERQKVVCKGVTLRDDTWGNFKLTN 277
V VKW KE Y VEV+T P++FKAQ+FALT V PERQKVV G TL DD W +
Sbjct: 4 VNVKWQKEKYV-VEVDTSAPPMVFKAQLFALTQVVPERQKVVIMGRTLGDDDWEGITIKE 62
Query: 278 NALVLVMGSKEEDVPAAP-VEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCL 454
N +++MGS E +P P V + + +AE +A+ P GL NLGNTCY N+ VQ L
Sbjct: 63 NMTIMMMGSVGE-IPKPPTVLEKKQANRDKQAEEISAL-YPCGLANLGNTCYFNSCVQML 120
Query: 455 KTVPEL 472
K V EL
Sbjct: 121 KEVNEL 126
>AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical
protein Y71A12B.9 protein.
Length = 699
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +2
Query: 395 PEGLINLGNTCYMNATVQCLKTVPELRNALLN 490
P G+ N+GNTC+MNA +Q L ++ E R +++
Sbjct: 377 PRGMRNVGNTCFMNAVLQALASISEFREYIMS 408
>AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical
protein H34C03.2 protein.
Length = 900
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Frame = +2
Query: 401 GLINLGNTCYMNATVQCLKTVPELRNALL-NYDKSSTGGD----TAGELTAALSETVSAL 565
GL NLGNTC+M + QCL +P LR L N ++ D T G L A+ E + +
Sbjct: 276 GLSNLGNTCFMASAFQCLSNMPPLREYFLANTYQNDINEDNPLGTHGHLAMAVGELMKGM 335
>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 39.1 bits (87), Expect = 0.002
Identities = 37/124 (29%), Positives = 54/124 (43%), Gaps = 3/124 (2%)
Frame = +2
Query: 140 VNTDDEPVLF-KAQIFALTGVQP--ERQKVVCKGVTLRDDTWGNFKLTNNALVLVMGSKE 310
VNTD++ V F KA A Q K RD+ + +L ++ ++
Sbjct: 29 VNTDEDQVTFSKAMEVAKLDCQKCLLHDMHSSKSSNCRDNPFCIHRLGLEKFEKLITQEQ 88
Query: 311 EDVPAAPVEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCLKTVPELRNALLN 490
E A +Q R D+N D P GLIN GN CY+N+ +Q VPE R + +
Sbjct: 89 ETKEEAKKDQKR--RDLN--------DQPAGLINGGNFCYVNSFLQVWFNVPEFRQLIYD 138
Query: 491 YDKS 502
+ S
Sbjct: 139 FRPS 142
>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 39.1 bits (87), Expect = 0.002
Identities = 37/124 (29%), Positives = 54/124 (43%), Gaps = 3/124 (2%)
Frame = +2
Query: 140 VNTDDEPVLF-KAQIFALTGVQP--ERQKVVCKGVTLRDDTWGNFKLTNNALVLVMGSKE 310
VNTD++ V F KA A Q K RD+ + +L ++ ++
Sbjct: 29 VNTDEDQVTFSKAMEVAKLDCQKCLLHDMHSSKSSNCRDNPFCIHRLGLEKFEKLITQEQ 88
Query: 311 EDVPAAPVEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCLKTVPELRNALLN 490
E A +Q R D+N D P GLIN GN CY+N+ +Q VPE R + +
Sbjct: 89 ETKEEAKKDQKR--RDLN--------DQPAGLINGGNFCYVNSFLQVWFNVPEFRQLIYD 138
Query: 491 YDKS 502
+ S
Sbjct: 139 FRPS 142
>Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical
protein T05H10.1 protein.
Length = 1326
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 401 GLINLGNTCYMNATVQCLKTVPELRNALLNYD 496
GL+N TCY+N+ VQ L PE RNA+ +++
Sbjct: 89 GLVNQAMTCYLNSLVQSLYMTPEFRNAMYDWE 120
>Z29095-11|CAB54286.2| 426|Caenorhabditis elegans Hypothetical
protein R10E11.3a protein.
Length = 426
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 401 GLINLGNTCYMNATVQCLKTVPELRNALLNYDKS-STGGDTAGELTAALSE 550
GL+N GNTCY N+ +Q L R +LNY ++ G + L L++
Sbjct: 28 GLVNFGNTCYCNSVIQALFFCRPFREKVLNYKQTLKKSGASKDNLVTCLAD 78
>AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical
protein Y59A8B.2 protein.
Length = 357
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2
Query: 401 GLINLGNTCYMNATVQCLKTVPEL 472
GL N+GNTC+M+AT+QCL P L
Sbjct: 25 GLFNMGNTCFMSATLQCLFQTPGL 48
>U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis defect
protein 3, isoformb protein.
Length = 1178
Score = 37.5 bits (83), Expect = 0.008
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +2
Query: 362 NEAELATAMDMPE--GLINLGNTCYMNATVQCLKTVPELRNALLNYD 496
+ A+L+ + P GL+N GN CY NA +QCL V L L+ D
Sbjct: 556 SNAQLSDSSGRPGAVGLVNYGNFCYRNAGIQCLARVSPLTQYFLDED 602
>Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 37.1 bits (82), Expect = 0.010
Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = +2
Query: 401 GLINLGNTCYMNATVQCLKTVPELRN---ALLNYDKSSTGGDTAGELTAALSETVSALD 568
G+ N G TCYMNA +Q L VP L AL N D GD L L + L+
Sbjct: 1768 GMKNDGGTCYMNAMIQQLVHVPGLSRELIALQNIDPQLRWGDNTAALLCELQRVFAQLN 1826
>Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 37.1 bits (82), Expect = 0.010
Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = +2
Query: 401 GLINLGNTCYMNATVQCLKTVPELRN---ALLNYDKSSTGGDTAGELTAALSETVSALD 568
G+ N G TCYMNA +Q L VP L AL N D GD L L + L+
Sbjct: 1765 GMKNDGGTCYMNAMIQQLVHVPGLSRELIALQNIDPQLRWGDNTAALLCELQRVFAQLN 1823
>Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 37.1 bits (82), Expect = 0.010
Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = +2
Query: 401 GLINLGNTCYMNATVQCLKTVPELRN---ALLNYDKSSTGGDTAGELTAALSETVSALD 568
G+ N G TCYMNA +Q L VP L AL N D GD L L + L+
Sbjct: 1768 GMKNDGGTCYMNAMIQQLVHVPGLSRELIALQNIDPQLRWGDNTAALLCELQRVFAQLN 1826
>Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 37.1 bits (82), Expect = 0.010
Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = +2
Query: 401 GLINLGNTCYMNATVQCLKTVPELRN---ALLNYDKSSTGGDTAGELTAALSETVSALD 568
G+ N G TCYMNA +Q L VP L AL N D GD L L + L+
Sbjct: 1765 GMKNDGGTCYMNAMIQQLVHVPGLSRELIALQNIDPQLRWGDNTAALLCELQRVFAQLN 1823
>U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis defect
protein 3, isoforma protein.
Length = 1175
Score = 37.1 bits (82), Expect = 0.010
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +2
Query: 401 GLINLGNTCYMNATVQCLKTVPELRNALLNYD 496
GL+N GN CY NA +QCL V L L+ D
Sbjct: 568 GLVNYGNFCYRNAGIQCLARVSPLTQYFLDED 599
>AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin
c-terminal hydrolase protein.
Length = 1175
Score = 37.1 bits (82), Expect = 0.010
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +2
Query: 401 GLINLGNTCYMNATVQCLKTVPELRNALLNYD 496
GL+N GN CY NA +QCL V L L+ D
Sbjct: 568 GLVNYGNFCYRNAGIQCLARVSPLTQYFLDED 599
>AC091125-6|AAK27886.3| 474|Caenorhabditis elegans Hypothetical
protein Y67D2.2 protein.
Length = 474
Score = 36.3 bits (80), Expect = 0.017
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +2
Query: 347 FVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCLKTVP 466
F+ N E +++ +P GL N GNTCYMNA +Q L + P
Sbjct: 29 FLTSRNGEEASSSRLVP-GLANQGNTCYMNALLQGLASCP 67
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 34.7 bits (76), Expect = 0.053
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +2
Query: 401 GLINLGNTCYMNATVQCLKTVPELRNALL 487
GL N+GNTC+MNA +Q L ELR L
Sbjct: 424 GLRNIGNTCFMNAVLQMLVNNIELREYFL 452
>Z47811-2|CAA87786.2| 1307|Caenorhabditis elegans Hypothetical
protein K02C4.3 protein.
Length = 1307
Score = 33.5 bits (73), Expect = 0.12
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 401 GLINLGNTCYMNATVQCLKTVPELRNAL 484
GL N GNTC++N Q L ++P+ R+ L
Sbjct: 200 GLYNSGNTCWLNCLSQVLYSIPKFRSIL 227
>AF003386-4|AAO38631.1| 452|Caenorhabditis elegans Hypothetical
protein F59E12.6b protein.
Length = 452
Score = 33.1 bits (72), Expect = 0.16
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +2
Query: 365 EAELATAMDMPEGLINLGNTCYMNATVQCLKTVPELRNALLNY 493
E++ + G+ N ++C+++ VQ L VP+L + LLN+
Sbjct: 22 ESDTLAQSESSVGIFNSSSSCWLSCIVQLLIRVPQLESVLLNF 64
>AF003386-3|AAO38630.1| 499|Caenorhabditis elegans Hypothetical
protein F59E12.6a protein.
Length = 499
Score = 33.1 bits (72), Expect = 0.16
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +2
Query: 365 EAELATAMDMPEGLINLGNTCYMNATVQCLKTVPELRNALLNY 493
E++ + G+ N ++C+++ VQ L VP+L + LLN+
Sbjct: 69 ESDTLAQSESSVGIFNSSSSCWLSCIVQLLIRVPQLESVLLNF 111
>U88180-7|AAB42297.2| 789|Caenorhabditis elegans Hypothetical
protein T27A3.2 protein.
Length = 789
Score = 32.7 bits (71), Expect = 0.21
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +2
Query: 401 GLINLGNTCYMNATVQCLKTV 463
GL+N G++CYMN+ +Q L TV
Sbjct: 320 GLVNTGSSCYMNSVLQALVTV 340
>Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical
protein K09A9.4 protein.
Length = 716
Score = 32.3 bits (70), Expect = 0.28
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 401 GLINLGNTCYMNATVQCL 454
G +N GNTCYMNA +Q L
Sbjct: 183 GYLNFGNTCYMNAVLQLL 200
>AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical
protein Y106G6H.12 protein.
Length = 975
Score = 32.3 bits (70), Expect = 0.28
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 404 LINLGNTCYMNATVQCLKTVPEL 472
L N GN+CY N+T+Q L + P L
Sbjct: 284 LYNTGNSCYFNSTMQALSSCPSL 306
>Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical
protein H19N07.2c protein.
Length = 1135
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 401 GLINLGNTCYMNATVQCLKTVPELRNALLNYD 496
GL N G TCYMN+ +Q R A+ N D
Sbjct: 194 GLRNQGATCYMNSILQSFYFTTGFRRAVYNMD 225
>Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical
protein H19N07.2b protein.
Length = 1130
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 401 GLINLGNTCYMNATVQCLKTVPELRNALLNYD 496
GL N G TCYMN+ +Q R A+ N D
Sbjct: 194 GLRNQGATCYMNSILQSFYFTTGFRRAVYNMD 225
>Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical
protein H19N07.2a protein.
Length = 1133
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 401 GLINLGNTCYMNATVQCLKTVPELRNALLNYD 496
GL N G TCYMN+ +Q R A+ N D
Sbjct: 194 GLRNQGATCYMNSILQSFYFTTGFRRAVYNMD 225
>U97012-5|AAK39149.1| 515|Caenorhabditis elegans Hypothetical
protein C04E6.5 protein.
Length = 515
Score = 29.1 bits (62), Expect = 2.6
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +2
Query: 404 LINLGNTCYMNATVQCLKT 460
L+N GN+C++N+T+Q L +
Sbjct: 147 LVNTGNSCFLNSTMQALSS 165
>AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylating
with usp/ubp andotu domains protein 2 protein.
Length = 551
Score = 29.1 bits (62), Expect = 2.6
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +2
Query: 389 DMPEGLINLGNTCYMNATVQCLKT 460
++ + L+N GN+CY N+T+Q + +
Sbjct: 31 ELRKRLVNTGNSCYYNSTLQAMSS 54
>Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical
protein F38B7.5 protein.
Length = 822
Score = 28.3 bits (60), Expect = 4.6
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +2
Query: 404 LINLGNTCYMNATVQCLKT 460
L+N GN+CY N+T+Q + +
Sbjct: 216 LVNTGNSCYYNSTMQAVSS 234
>U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related.
see also lmb-protein 2 protein.
Length = 1535
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +2
Query: 368 AELATAMDMPEGLINLGNTCYMNATVQCLKTVPELRNALLNYDKSST 508
AEL ++D P GN CY AT Q + VP+ NA N + T
Sbjct: 7 AELYPSVD-PNHFGADGNPCYDRATRQPQRCVPDFVNAAFNLEVQVT 52
>AB095019-1|BAC22611.1| 822|Caenorhabditis elegans
ubiquitin-specific protease protein.
Length = 822
Score = 28.3 bits (60), Expect = 4.6
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +2
Query: 404 LINLGNTCYMNATVQCLKT 460
L+N GN+CY N+T+Q + +
Sbjct: 216 LVNTGNSCYYNSTMQAVSS 234
>Z29645-1|CAA82753.1| 522|Caenorhabditis elegans kinesin light
chain (isoform 2) protein.
Length = 522
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 300 AVKRKTCQQHQWNRHVLSKT*MKLNWLQPWICQ 398
A +R+ CQ++ W R LS T +KL + + Q
Sbjct: 113 AQRRRLCQENAWLRDELSSTQIKLQQSEQMVAQ 145
>Z29644-1|CAA82752.1| 540|Caenorhabditis elegans kinesin light
chain (isoform 1) protein.
Length = 540
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 300 AVKRKTCQQHQWNRHVLSKT*MKLNWLQPWICQ 398
A +R+ CQ++ W R LS T +KL + + Q
Sbjct: 92 AQRRRLCQENAWLRDELSSTQIKLQQSEQMVAQ 124
>U55369-14|AAN84862.1| 540|Caenorhabditis elegans Kinesin light
chain protein 2,isoform b protein.
Length = 540
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 300 AVKRKTCQQHQWNRHVLSKT*MKLNWLQPWICQ 398
A +R+ CQ++ W R LS T +KL + + Q
Sbjct: 92 AQRRRLCQENAWLRDELSSTQIKLQQSEQMVAQ 124
>U55369-13|AAN84863.1| 501|Caenorhabditis elegans Kinesin light
chain protein 2,isoform c protein.
Length = 501
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 300 AVKRKTCQQHQWNRHVLSKT*MKLNWLQPWICQ 398
A +R+ CQ++ W R LS T +KL + + Q
Sbjct: 92 AQRRRLCQENAWLRDELSSTQIKLQQSEQMVAQ 124
>U55369-12|AAK52182.1| 522|Caenorhabditis elegans Kinesin light
chain protein 2,isoform a protein.
Length = 522
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 300 AVKRKTCQQHQWNRHVLSKT*MKLNWLQPWICQ 398
A +R+ CQ++ W R LS T +KL + + Q
Sbjct: 113 AQRRRLCQENAWLRDELSSTQIKLQQSEQMVAQ 145
>U55369-11|AAT68902.1| 531|Caenorhabditis elegans Kinesin light
chain protein 2,isoform d protein.
Length = 531
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 300 AVKRKTCQQHQWNRHVLSKT*MKLNWLQPWICQ 398
A +R+ CQ++ W R LS T +KL + + Q
Sbjct: 92 AQRRRLCQENAWLRDELSSTQIKLQQSEQMVAQ 124
>AF026212-1|AAF99971.1| 807|Caenorhabditis elegans Hypothetical
protein F52G3.3 protein.
Length = 807
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +2
Query: 317 VPAAPVEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCLKTVPELRNALLNY 493
VPA PVE+ +F E + E L + + C+MNA + L +R + +
Sbjct: 541 VPAEPVEEIQFDEPIEEQTLMPFLFLDNSFGQ--QNCFMNALLNMLFVSATIREKFVEF 597
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,600,866
Number of Sequences: 27780
Number of extensions: 275189
Number of successful extensions: 769
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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