Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc21l15
         (596 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          23   2.3  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   5.3  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   5.3  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   5.3  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   6.9  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   6.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   6.9  

>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 362 VLTNYILIYANHFKIPPLNGF 424
           +L +++ IYA    +PPL G+
Sbjct: 17  ILASFVWIYALSLSLPPLFGW 37


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 547 KLDKIEEFTYLPLKG 591
           ++D  EE++YL LKG
Sbjct: 284 RVDASEEYSYLRLKG 298


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 547 KLDKIEEFTYLPLKG 591
           ++D  EE++YL LKG
Sbjct: 284 RVDASEEYSYLRLKG 298


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -3

Query: 282 REFYNPIRLLQTRFLNEFDGYFE*GQNTIDFS 187
           R+ YN +R        + D +++ G N I FS
Sbjct: 385 RQIYNMVRFRNLVKGTKIDNWWDNGSNQIAFS 416


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -1

Query: 374 NWSILLALDHNSIQFFIKTDREAIFFAQ 291
           N+S LL+ D   + +F +    A ++AQ
Sbjct: 197 NYSALLSHDEQQLSYFTQDIGLAAYYAQ 224


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 290 SSEGSSTIQYGFSKHGFSMNLM 225
           S +GS T +Y    +GF   L+
Sbjct: 582 SEDGSETFKYSSQPYGFPERLL 603


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 290 SSEGSSTIQYGFSKHGFSMNLM 225
           S +GS T +Y    +GF   L+
Sbjct: 582 SEDGSETFKYSSQPYGFPERLL 603


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,329
Number of Sequences: 438
Number of extensions: 3868
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)