Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc21l06
(618 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC970.07c |raf2|dos2, cmc2, clr7|Rik1-associated factor Raf2|S... 31 0.18
SPBC1604.11 |atp17||F0 ATPase subunit F|Schizosaccharomyces pomb... 29 0.71
SPAC27E2.06c |||methionine-tRNA ligase, mitochondrial|Schizosacc... 29 0.71
SPAC1805.15c |pub2||ubiquitin-protein ligase Pub2|Schizosaccharo... 27 1.6
SPCC31H12.07 |sec231|sec23a, SPCC5E4.01|GTPase activating protei... 27 2.9
SPAC25A8.03c ||SPAC3C7.15c|DUF185 protein|Schizosaccharomyces po... 27 2.9
SPBC19G7.18c ||SPBC19G7.11c|sequence orphan|Schizosaccharomyces ... 27 2.9
SPAC1F3.10c |oct1||mitochondrial intermediate peptidase Oct1 |Sc... 26 3.8
SPBC1105.01 |rrp12|SPBPB7E8.03|rRNA processing protein Rrp12|Sch... 26 3.8
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 26 5.0
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 26 5.0
SPBC3B9.03 |||signal recognition particle receptor alpha subunit... 26 5.0
SPBC13G1.13 |tfb2|SPBC31F10.01|transcription factor TFIIH comple... 25 6.6
SPAC23G3.12c |||serine protease |Schizosaccharomyces pombe|chr 1... 25 6.6
SPBC25B2.06c |btb2||BTB/POZ domain protein Btb2|Schizosaccharomy... 25 6.6
SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase YakC|Schizo... 25 6.6
SPCC594.02c |||conserved fungal protein|Schizosaccharomyces pomb... 25 6.6
SPBP4H10.19c |||calreticulin/calnexin homolog|Schizosaccharomyce... 25 8.8
SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces po... 25 8.8
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 25 8.8
SPAC1399.05c |||transcription factor, zf-fungal binuclear cluste... 25 8.8
>SPCC970.07c |raf2|dos2, cmc2, clr7|Rik1-associated factor
Raf2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 30.7 bits (66), Expect = 0.18
Identities = 22/79 (27%), Positives = 35/79 (44%)
Frame = +1
Query: 109 SSDDYNEGGYESYGDYEAQSTEHYEPEYDRSSYYKMPDMVKKFLVYFRNMINEGVTYEIL 288
S DY YE Y ++ A + E ++++ +PD VK F + F E+L
Sbjct: 430 SGSDYT---YEQYINHSAVAFSFTEEIFEKNFVTVLPDFVKLFSISFGYWPAFSFYDELL 486
Query: 289 NLYENTFPTLTEKYFENTP 345
L N +P K + +TP
Sbjct: 487 KLLRNKYP----KVYSSTP 501
>SPBC1604.11 |atp17||F0 ATPase subunit F|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 96
Score = 28.7 bits (61), Expect = 0.71
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +1
Query: 343 PWPDEDEVSPIVDND---NVFMILYKELYYRDIYARVPGGPKPEQRFHSFYNY 492
P+P + + P V N N F + D Y+R+P GP P++ +SF+++
Sbjct: 3 PFPLKSFIPPQVANPTALNAFPSSARMGRIVDFYSRLPHGPAPKKSSNSFFSW 55
>SPAC27E2.06c |||methionine-tRNA ligase,
mitochondrial|Schizosaccharomyces pombe|chr 1|||Manual
Length = 539
Score = 28.7 bits (61), Expect = 0.71
Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +1
Query: 166 STEHYEPEYDRSSYYKMPDMVKKFL---VYFRNMINEGVTYEILNLYENTFPTLTEKYFE 336
S E + + + + + D+V + + V I+ G YE++NL ++ +T+ +
Sbjct: 397 SNEIQKQWHKKDDFTEYEDIVHELIELPVVCAQSIDGGCVYEVINLVQSVLRRVTKLFQL 456
Query: 337 NTPWPDEDEVSPIVD 381
PW D+ +D
Sbjct: 457 KEPWKLSDDSQEKID 471
>SPAC1805.15c |pub2||ubiquitin-protein ligase
Pub2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 671
Score = 27.5 bits (58), Expect = 1.6
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 178 YEPEYDRSSYYKMPDMVKKFLVYFRNMINEGVTY 279
+E YD S + DM KK L+ FRN +G+ Y
Sbjct: 327 FEDAYDIISKLSVSDMKKKLLIRFRN--EDGLDY 358
>SPCC31H12.07 |sec231|sec23a, SPCC5E4.01|GTPase activating protein
Sec23a|Schizosaccharomyces pombe|chr 3|||Manual
Length = 759
Score = 26.6 bits (56), Expect = 2.9
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = -3
Query: 226 PCQAFYNKKTCHIPARSVLWTVLHSRHRIRNLPHYNRRWNTWLLIE 89
PC+A N CHI R+ W R P Y NT L IE
Sbjct: 59 PCKAVLNPY-CHIDTRAKFWICPFCLQRNMLPPQYKDISNTSLPIE 103
>SPAC25A8.03c ||SPAC3C7.15c|DUF185 protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 467
Score = 26.6 bits (56), Expect = 2.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -3
Query: 175 VLWTVLHSRHRIRNLPHYNRRWN 107
+L H+R I +LPH+ RRW+
Sbjct: 407 ILQLATHNRSFICSLPHFLRRWS 429
>SPBC19G7.18c ||SPBC19G7.11c|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 252
Score = 26.6 bits (56), Expect = 2.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -1
Query: 261 NHVAKVNKEFLDHVRHFIIRRPVIFRLVVFCGLCFIVAIGFVTSLIIIVAGIHG 100
NH + KEFL+H ++ + R + LV F ++ VT + + I G
Sbjct: 14 NHFSDDQKEFLNHAKYRVKRNTIFGMLVGFSLPLYLARNKKVTPIRLYATSIIG 67
>SPAC1F3.10c |oct1||mitochondrial intermediate peptidase Oct1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 762
Score = 26.2 bits (55), Expect = 3.8
Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 154 YEAQSTEHYEPEYDRSSYYKMPDMVKKFLVYFRNMINEGVTYEILNLYENTFPTLTEKYF 333
++ E+Y Y +S + P + + +R + G + L+ ++ L
Sbjct: 374 FDVWDREYYTARYKQSLINQKPSL-NPSITNYRRFFSVGTVIQGLSRLFSSLYGLRFVPA 432
Query: 334 ENTP---W-PDEDEVSPIVDNDNVFMILYKELYYR 426
+ +P W PD ++V+ +ND+V ++Y +L+ R
Sbjct: 433 DISPGEVWHPDVNKVNVYNENDHVMGVIYFDLFAR 467
>SPBC1105.01 |rrp12|SPBPB7E8.03|rRNA processing protein
Rrp12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1001
Score = 26.2 bits (55), Expect = 3.8
Identities = 12/43 (27%), Positives = 26/43 (60%)
Frame = +1
Query: 253 NMINEGVTYEILNLYENTFPTLTEKYFENTPWPDEDEVSPIVD 381
+MI+ + + LNL +T LT ++E + + D+D V+ +++
Sbjct: 795 SMISANLMNDSLNLKVSTIFALTRIFYEFSDYIDDDYVNAVLE 837
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 25.8 bits (54), Expect = 5.0
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +1
Query: 103 MYSSDDYNEGGYESYGDYEAQSTEHYEPEYDRSSY 207
M+ +D + GG + D++++ + Y P D SY
Sbjct: 19 MFGADTGSIGGITNMRDFQSRFADRYNPVTDTYSY 53
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 25.8 bits (54), Expect = 5.0
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 328 YFENTPWPDEDEVSPIVDNDNVFM 399
YF++ W D+D +SP + N+ M
Sbjct: 451 YFKDDSWMDDDYISPCMTTYNLTM 474
>SPBC3B9.03 |||signal recognition particle receptor alpha subunit
Srp101|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 25.8 bits (54), Expect = 5.0
Identities = 16/68 (23%), Positives = 32/68 (47%)
Frame = +1
Query: 172 EHYEPEYDRSSYYKMPDMVKKFLVYFRNMINEGVTYEILNLYENTFPTLTEKYFENTPWP 351
+ Y +Y ++ Y + F+V F+++ + +LN N F L ++ E+ P
Sbjct: 50 DRYTMQYQEATQYSIV-----FVVVFQDLKCMAYSQSLLNSAHNIFLNLFKEKLEDRQVP 104
Query: 352 DEDEVSPI 375
+E EV +
Sbjct: 105 NEAEVEKL 112
>SPBC13G1.13 |tfb2|SPBC31F10.01|transcription factor TFIIH complex
subunit Tfb2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 447
Score = 25.4 bits (53), Expect = 6.6
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +1
Query: 508 YILSV--TPVPLELPDQWLWELIDEFVYQFXSF 600
Y++S+ P+P+ L D LW + VYQ SF
Sbjct: 43 YVMSMLFNPMPVALSDFDLWIKLSSKVYQSESF 75
>SPAC23G3.12c |||serine protease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 996
Score = 25.4 bits (53), Expect = 6.6
Identities = 10/44 (22%), Positives = 20/44 (45%)
Frame = -1
Query: 321 SECGEGILIEVQDLICYTFINHVAKVNKEFLDHVRHFIIRRPVI 190
++CG G+L + L+ ++ H + D H + PV+
Sbjct: 681 TQCGSGVLTDDDGLVVALWLTHYGEQTSRGTDVKYHLGLASPVV 724
>SPBC25B2.06c |btb2||BTB/POZ domain protein Btb2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 284
Score = 25.4 bits (53), Expect = 6.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 256 MINEGVTYEILNLYENTFPTLTEKYFENTPWPD 354
+I +G TY + L+ P L +K EN P D
Sbjct: 41 LIIKGETYHLHALFLGRSPVLLQKLIENNPKGD 73
>SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase
YakC|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 25.4 bits (53), Expect = 6.6
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +1
Query: 130 GGYESYGDYEAQSTEHYEPEYDRSSYYKMPDMVKK 234
G Y+S D+ P Y + ++YK ++V K
Sbjct: 217 GAYKSPDDFPEGDFRRKAPRYQKENFYKNLELVTK 251
>SPCC594.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 489
Score = 25.4 bits (53), Expect = 6.6
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +1
Query: 436 ARVPGGPKPEQRFHSFYNYCDLFNYILSVTPVPLELPDQWLWELID 573
A + PKPE + Y DL VTP PLE P E+++
Sbjct: 281 ANITALPKPEPKM---YENSDLTPARTPVTPAPLEKPVNLAPEVVE 323
>SPBP4H10.19c |||calreticulin/calnexin homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 25.0 bits (52), Expect = 8.8
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +1
Query: 247 FRNMINEGVTYEILNLYEN-TFPTLTEKYFENTPWPDEDEVSPIVDNDNVFMILYKELY- 420
F N I G + +EN TF + +K EN+P P++ + P + M+L +Y
Sbjct: 269 FINNIYFGFSLSDAMKFENETF--IAKKILENSPCPNQPSIQPF----GILMMLVSTIYG 322
Query: 421 -YRDIY 435
++++Y
Sbjct: 323 NFKNLY 328
>SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 25.0 bits (52), Expect = 8.8
Identities = 10/42 (23%), Positives = 22/42 (52%)
Frame = +2
Query: 350 QMKMRSHLLWTMIMYS*SYTKNYTTVTSMQESLEDQNQSSAS 475
Q S +W + ++ K+YT T ++ +EDQ + +++
Sbjct: 431 QFPFESRKIWFPVTHN-ILAKHYTQATKAKQEIEDQQRQASA 471
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase
kinase Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 25.0 bits (52), Expect = 8.8
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +1
Query: 337 NTPWPDEDEVSPIVDNDNVFMIL--YKELY 420
N W + +E++PIV DN+ L Y+ LY
Sbjct: 396 NFHWDESNELTPIVAVDNMLQKLDKYERLY 425
>SPAC1399.05c |||transcription factor, zf-fungal binuclear cluster
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 529
Score = 25.0 bits (52), Expect = 8.8
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3
Query: 436 HRCHGSIVLCIG 401
H CHG +V+C+G
Sbjct: 272 HLCHGHLVMCMG 283
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,471,271
Number of Sequences: 5004
Number of extensions: 51728
Number of successful extensions: 194
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 194
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 271646730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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