Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc21l06
(618 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 24 1.4
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 23 1.8
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 22 4.2
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 4.2
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 7.3
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 7.3
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 7.3
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 7.3
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 21 9.6
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 21 9.6
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 9.6
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 23.8 bits (49), Expect = 1.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 238 LVYFRNMINEGVTYEILNLYENTFPTLTEKYFENTP 345
LVY + NEG I N +N+F LT F + P
Sbjct: 200 LVYIGD--NEGFALIIYNNSDNSFQRLTSSTFASDP 233
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 23.4 bits (48), Expect = 1.8
Identities = 18/75 (24%), Positives = 33/75 (44%)
Frame = +1
Query: 154 YEAQSTEHYEPEYDRSSYYKMPDMVKKFLVYFRNMINEGVTYEILNLYENTFPTLTEKYF 333
Y A ++ P Y R Y DM + Y+++ + G + + Y + P+ +
Sbjct: 66 YGAAGSQQDMP-YPRFPPYNRMDM--RNATYYQHQQDHGSGMDGMGGYRSASPSPGMGHM 122
Query: 334 ENTPWPDEDEVSPIV 378
+TP P+ +PIV
Sbjct: 123 GHTPTPNGHPSTPIV 137
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 404 YTKNYTTVTSMQESLED 454
YTK+ TV M E++ED
Sbjct: 442 YTKDSYTVAGMGETIED 458
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 404 YTKNYTTVTSMQESLEDQN 460
Y KNYT S ++ L QN
Sbjct: 446 YNKNYTKFCSTEKRLTKQN 464
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 7.3
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +1
Query: 454 PKPEQRFHSFYNYCDLFNYILSVTPVPLELP 546
P+P F S F YI TP P +P
Sbjct: 126 PRPMGPFVSMQEQIPRFRYIGPPTPFPRFIP 156
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 7.3
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +1
Query: 454 PKPEQRFHSFYNYCDLFNYILSVTPVPLELP 546
P+P F S F YI TP P +P
Sbjct: 126 PRPMGPFVSMQEQIPRFRYIGPPTPFPRFIP 156
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 7.3
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +1
Query: 454 PKPEQRFHSFYNYCDLFNYILSVTPVPLELP 546
P+P F S F YI TP P +P
Sbjct: 126 PRPMGPFVSMQEQIPRFRYIGPPTPFPRFIP 156
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 7.3
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +1
Query: 454 PKPEQRFHSFYNYCDLFNYILSVTPVPLELP 546
P+P F S F YI TP P +P
Sbjct: 126 PRPMGPFVSMQEQIPRFRYIGPPTPFPRFIP 156
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +1
Query: 106 YSSDDYNEGGYESYG 150
Y S Y+EG Y YG
Sbjct: 140 YVSTVYSEGSYGEYG 154
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.0 bits (42), Expect = 9.6
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = +1
Query: 139 ESYGDYEAQSTEHYEPEYDRSSYYKMP 219
E Y Y A + E+D S+Y P
Sbjct: 771 EHYALYTAMAPHATASEFDEMSFYYSP 797
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +1
Query: 106 YSSDDYNEGGYESYG 150
Y S Y+EG Y YG
Sbjct: 230 YVSTVYSEGSYGEYG 244
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,339
Number of Sequences: 438
Number of extensions: 3798
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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