Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc21l04
         (695 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88315-8|AAN84845.1|  472|Caenorhabditis elegans Nematode astaci...    29   2.4  
U88315-7|AAL16314.1|  546|Caenorhabditis elegans Nematode astaci...    29   2.4  
U88315-6|AAB42372.1|  517|Caenorhabditis elegans Nematode astaci...    29   2.4  
AC103567-9|AAL35735.1|  204|Caenorhabditis elegans Hypothetical ...    28   5.5  
Z29094-8|CAA82337.1|  254|Caenorhabditis elegans Hypothetical pr...    27   9.7  

>U88315-8|AAN84845.1|  472|Caenorhabditis elegans Nematode astacin
           protease protein9, isoform c protein.
          Length = 472

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -3

Query: 651 PRREVVGWGRRRTALCGRHWGRPMSSSGQI 562
           PR   + WGRR    C R+ G P    GQ+
Sbjct: 19  PRPSSMEWGRRARHFCRRYPGHPKCQRGQL 48


>U88315-7|AAL16314.1|  546|Caenorhabditis elegans Nematode astacin
           protease protein9, isoform b protein.
          Length = 546

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -3

Query: 651 PRREVVGWGRRRTALCGRHWGRPMSSSGQI 562
           PR   + WGRR    C R+ G P    GQ+
Sbjct: 93  PRPSSMEWGRRARHFCRRYPGHPKCQRGQL 122


>U88315-6|AAB42372.1|  517|Caenorhabditis elegans Nematode astacin
           protease protein9, isoform a protein.
          Length = 517

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -3

Query: 651 PRREVVGWGRRRTALCGRHWGRPMSSSGQI 562
           PR   + WGRR    C R+ G P    GQ+
Sbjct: 93  PRPSSMEWGRRARHFCRRYPGHPKCQRGQL 122


>AC103567-9|AAL35735.1|  204|Caenorhabditis elegans Hypothetical
           protein Y51F10.8 protein.
          Length = 204

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 9/52 (17%)
 Frame = -2

Query: 691 VGRSPTKWTDDLVPXAGSR---------WMGKAEDRIMWKALGKAYVQQWAD 563
           VGR P +W D L     +R         W  +A+DR  WKA+ +A  ++  D
Sbjct: 153 VGRPPMRWNDSLRKEVTTRDAFGQVKQLWSTQAKDRKAWKAVIRAAGEERID 204


>Z29094-8|CAA82337.1|  254|Caenorhabditis elegans Hypothetical
           protein C07A9.10 protein.
          Length = 254

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 9/42 (21%)
 Frame = -2

Query: 691 VGRSPTKWTDDLVPXAGSR---------WMGKAEDRIMWKAL 593
           VG+ P +WTD L     +R         W  +A+DR  WKA+
Sbjct: 17  VGKPPMRWTDSLRKEITTRDMGNNIITPWSTQAKDRKAWKAV 58


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,373,086
Number of Sequences: 27780
Number of extensions: 270614
Number of successful extensions: 547
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 545
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)