Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc21k24
         (313 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0387 - 3426058-3426168,3426279-3426473,3426612-3426724,342...    27   3.1  
04_04_1392 + 33201015-33201600,33202030-33202406,33202528-332026...    26   5.4  
01_02_0053 + 10673264-10674510,10674552-10674576,10674802-106748...    26   7.2  
03_06_0643 + 35248597-35250585,35250663-35250773,35250867-352509...    25   9.5  
03_01_0639 - 4678993-4679034,4679880-4679945,4680040-4680150,468...    25   9.5  
01_07_0122 - 41196081-41196205,41197561-41198245,41198961-411993...    25   9.5  

>08_01_0387 -
           3426058-3426168,3426279-3426473,3426612-3426724,
           3427121-3427157,3427270-3427341,3427849-3427962,
           3428129-3428200,3428343-3428381,3429340-3429414,
           3429561-3429674,3429749-3429813,3429927-3430047,
           3430942-3431063,3431547-3431634
          Length = 445

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 206 IMEKNASLLFDDADDWAGGYR 268
           +++K  S  FDDADD  G YR
Sbjct: 369 LLDKKTSSEFDDADDEVGRYR 389


>04_04_1392 +
           33201015-33201600,33202030-33202406,33202528-33202638,
           33202720-33202815,33202899-33203570
          Length = 613

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 272 HHGILQPSHQHHQ 234
           HH +L PSH HH+
Sbjct: 13  HHRVLLPSHHHHR 25


>01_02_0053 +
           10673264-10674510,10674552-10674576,10674802-10674886,
           10675074-10675084
          Length = 455

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
 Frame = -2

Query: 303 PYSLFYYKTLASRYPPAQSSASSNKRL-AFFSIISSLHFLHAATLLQPLVE 154
           P  L  Y TL S  PP    AS +  L +F    S  H LH+  L   L +
Sbjct: 85  PTFLRRYPTLLSVSPPPNPVASPSPHLLSFLEFASRHHALHSPLLASRLAK 135


>03_06_0643 +
           35248597-35250585,35250663-35250773,35250867-35250971,
           35252215-35252304
          Length = 764

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -3

Query: 260 LQPSHQHHQTKDLHSSPLSAVFI 192
           +Q SH HH    LH S    VFI
Sbjct: 716 VQSSHPHHYGNQLHPSNTMQVFI 738


>03_01_0639 -
           4678993-4679034,4679880-4679945,4680040-4680150,
           4680266-4680304,4680394-4680493,4680597-4680712,
           4680897-4681035,4681151-4681222,4681331-4681434,
           4681616-4681867
          Length = 346

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = -1

Query: 211 HYQQSSFFACSYPVTTISRIFCLSGTALVHEVYQSDFSYSQNSR 80
           ++   SFF   Y V  ++ +  ++   L ++VY SD    +N +
Sbjct: 91  YHHVGSFFGKRYFVLLVASVLVITWLNLSNDVYDSDTGADKNKK 134


>01_07_0122 -
           41196081-41196205,41197561-41198245,41198961-41199329,
           41199405-41199514,41200539-41200833
          Length = 527

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = -3

Query: 272 HHGILQPSHQHHQTKD-LHSSPLSAVFIFCMQLPCY 168
           HHG     H HH  +D  HS+P  A   + +  P Y
Sbjct: 350 HHGHHHHHHHHHGHEDSRHSAPAQAPVHYPVHEPRY 385


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,189,033
Number of Sequences: 37544
Number of extensions: 146649
Number of successful extensions: 288
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 288
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 388087168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)