Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc21k21
(590 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0042 + 473912-474058,474208-474349,474442-476264 252 2e-67
08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201 250 6e-67
09_04_0548 - 18469636-18470037,18471164-18472705,18474052-184744... 250 8e-67
09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540 250 8e-67
06_03_1404 - 29928792-29929040,29929147-29929551,29930130-299302... 191 4e-49
08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 175 2e-44
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631... 174 4e-44
09_04_0497 - 18096299-18096496,18096586-18096675,18096809-180969... 161 4e-40
08_02_0846 - 21811156-21811833,21811960-21812055,21812157-218122... 29 2.1
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 29 2.1
01_01_0188 - 1631006-1631017,1631171-1631307,1631934-1632033 29 3.7
06_03_0788 - 24603849-24603949,24604030-24604123,24604206-246044... 28 4.8
09_03_0108 + 12421719-12421749,12422794-12422892,12423370-12423890 27 8.5
05_01_0019 - 129767-129931,130078-130257,130491-130728,130833-13... 27 8.5
03_03_0008 - 13674602-13674708,13675272-13675439,13676169-136767... 27 8.5
01_01_0175 - 1503254-1503575,1504398-1504657,1506162-1507028 27 8.5
>04_01_0042 + 473912-474058,474208-474349,474442-476264
Length = 703
Score = 252 bits (616), Expect = 2e-67
Identities = 120/152 (78%), Positives = 138/152 (90%)
Frame = +1
Query: 133 ETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKL 312
+ Q AE ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKL
Sbjct: 6 DVQMAEKETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKL 65
Query: 313 DSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISM 492
D+ EL+I+++P K TL+IID+G+GMTK+DLVNNLGTIA+SGTK FMEALQAGAD+SM
Sbjct: 66 DAQPELFIRLVPYKPSKTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALQAGADVSM 125
Query: 493 IGQFGVGFYSSYLVADRVTVHSKHNDDEQYVW 588
IGQFGVGFYS+YLVA++V V +KHNDDEQYVW
Sbjct: 126 IGQFGVGFYSAYLVAEKVVVTTKHNDDEQYVW 157
>08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201
Length = 699
Score = 250 bits (612), Expect = 6e-67
Identities = 120/148 (81%), Positives = 135/148 (91%)
Frame = +1
Query: 145 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGK 324
+E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD+
Sbjct: 3 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQP 62
Query: 325 ELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQF 504
EL+I I+P+K TL+IID+GIGMTK+DLVNNLGTIA+SGTK FMEAL AGAD+SMIGQF
Sbjct: 63 ELFIHIVPDKASNTLSIIDSGIGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQF 122
Query: 505 GVGFYSSYLVADRVTVHSKHNDDEQYVW 588
GVGFYS+YLVA+RV V +KHNDDEQYVW
Sbjct: 123 GVGFYSAYLVAERVVVTTKHNDDEQYVW 150
>09_04_0548 -
18469636-18470037,18471164-18472705,18474052-18474474,
18474874-18474999
Length = 830
Score = 250 bits (611), Expect = 8e-67
Identities = 119/148 (80%), Positives = 135/148 (91%)
Frame = +1
Query: 145 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGK 324
+E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD+
Sbjct: 3 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQP 62
Query: 325 ELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQF 504
EL+I I+P+K TL+IID+G+GMTK+DLVNNLGTIA+SGTK FMEAL AGAD+SMIGQF
Sbjct: 63 ELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQF 122
Query: 505 GVGFYSSYLVADRVTVHSKHNDDEQYVW 588
GVGFYS+YLVA+RV V +KHNDDEQYVW
Sbjct: 123 GVGFYSAYLVAERVVVTTKHNDDEQYVW 150
>09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540
Length = 699
Score = 250 bits (611), Expect = 8e-67
Identities = 119/148 (80%), Positives = 135/148 (91%)
Frame = +1
Query: 145 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGK 324
+E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD+
Sbjct: 3 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQP 62
Query: 325 ELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQF 504
EL+I I+P+K TL+IID+G+GMTK+DLVNNLGTIA+SGTK FMEAL AGAD+SMIGQF
Sbjct: 63 ELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQF 122
Query: 505 GVGFYSSYLVADRVTVHSKHNDDEQYVW 588
GVGFYS+YLVA+RV V +KHNDDEQYVW
Sbjct: 123 GVGFYSAYLVAERVVVTTKHNDDEQYVW 150
>06_03_1404 -
29928792-29929040,29929147-29929551,29930130-29930280,
29930363-29930501,29930578-29930743,29930826-29931041,
29931142-29931323,29931412-29931538,29931974-29932112,
29932227-29932353,29932501-29932612,29932704-29932784,
29933330-29933483,29933569-29933689,29934003-29934045,
29934356-29934460
Length = 838
Score = 191 bits (465), Expect = 4e-49
Identities = 95/154 (61%), Positives = 119/154 (77%), Gaps = 2/154 (1%)
Frame = +1
Query: 133 ETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKL 312
+T + E F FQAE+++LM +IIN+ YSNK+IFLRELISN+SDALDKIR+ +LTD L
Sbjct: 98 KTLRSSAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLALTDKEVL 157
Query: 313 DSGK--ELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADI 486
G +L I+I +K + L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q G D+
Sbjct: 158 GEGDTAKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTGGDL 217
Query: 487 SMIGQFGVGFYSSYLVADRVTVHSKHNDDEQYVW 588
++IGQFGVGFYS YLVAD V V SKHNDD+Q+VW
Sbjct: 218 NLIGQFGVGFYSVYLVADYVEVISKHNDDKQHVW 251
>08_02_1073 -
24117834-24118037,24118122-24118211,24118299-24118404,
24118477-24118648,24118737-24118839,24118927-24119181,
24119259-24119336,24119449-24119541,24119660-24119800,
24119882-24119986,24120135-24120212,24120297-24120341,
24120463-24120579,24120685-24120828,24120934-24121017,
24121139-24121232,24121322-24121447,24121585-24121658,
24121870-24122098,24123124-24123611,24123702-24123749,
24123841-24124077,24124368-24124404,24125011-24125018
Length = 1051
Score = 175 bits (427), Expect = 2e-44
Identities = 88/159 (55%), Positives = 120/159 (75%), Gaps = 5/159 (3%)
Frame = +1
Query: 127 EMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPS 306
E + AE E F +QAE+++LM LI+++ YS+KE+FLREL+SN+SDALDK+R+ +TD S
Sbjct: 333 EKAEETAEEEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLGVTDSS 392
Query: 307 KLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQ----A 474
L G EL I+I P+ + GT+TI DTGIGMTK +L + LGTIA+SGT F++AL+
Sbjct: 393 LLADGGELEIRIKPDPDAGTITITDTGIGMTKDELKDCLGTIAQSGTSKFLKALKENKDL 452
Query: 475 GADISMIGQFGVGFYSSYLVADRVTVHSKH-NDDEQYVW 588
GAD +IGQFGVGFYS++LVA++V V +K D+QYVW
Sbjct: 453 GADNGLIGQFGVGFYSAFLVAEKVVVSTKSPKSDKQYVW 491
>12_02_0522 -
19960092-19960595,19962737-19962880,19963042-19963131,
19963215-19963320,19963400-19963574,19963849-19963951,
19964382-19964636,19964726-19964803,19964908-19965000,
19965091-19965222,19965898-19966002,19966127-19966201,
19966284-19966340,19966419-19966532,19966613-19966756,
19966886-19966969,19967071-19967164,19967244-19967369,
19967507-19967580,19967672-19967875,19968234-19968388,
19968860-19968947,19969505-19969730,19970235-19970286,
19970766-19970958,19973221-19973314,19973744-19973788,
19974874-19974896
Length = 1210
Score = 174 bits (424), Expect = 4e-44
Identities = 87/160 (54%), Positives = 119/160 (74%), Gaps = 5/160 (3%)
Frame = +1
Query: 124 EEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDP 303
+ +T P VE +QAE+ +LM LI+++ YSNKE+FLREL+SN+SDALDK+RY S+TDP
Sbjct: 345 DSSDTPP--VEKHEYQAEVNRLMDLIVHSLYSNKEVFLRELVSNASDALDKLRYLSVTDP 402
Query: 304 SKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEAL----Q 471
+ G L I+I +K G +TI DTGIGMT+ +LV++LGTIA SGT F++AL +
Sbjct: 403 DLIKDGAGLDIRIQTDKENGIITITDTGIGMTRQELVDSLGTIASSGTAKFLKALKESQE 462
Query: 472 AGADISMIGQFGVGFYSSYLVADRVTVHSKH-NDDEQYVW 588
AG D ++IGQFGVGFYS++LV+D+V V +K D+QYVW
Sbjct: 463 AGVDSNLIGQFGVGFYSAFLVSDKVAVSTKSPKSDKQYVW 502
>09_04_0497 -
18096299-18096496,18096586-18096675,18096809-18096914,
18097005-18097179,18097263-18097365,18097458-18097712,
18097791-18097868,18097986-18098078,18098179-18098319,
18098406-18098510,18098658-18098738,18098825-18098866,
18098966-18099082,18099208-18099351,18099485-18099568,
18099683-18099803,18099863-18099988,18100106-18100179,
18100388-18100657
Length = 800
Score = 161 bits (391), Expect = 4e-40
Identities = 86/164 (52%), Positives = 118/164 (71%), Gaps = 14/164 (8%)
Frame = +1
Query: 139 QPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDS 318
+ A E F +QAE+++L+ LI+++ YS+KE+FLREL+SN+SDALDK+R+ S+TD S L
Sbjct: 78 EEAAGEQFEYQAEVSRLLDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTDSSVLSD 137
Query: 319 GKELYIKIIPNKNEGTLTII---------DTGIGMTKADLVNNLGTIAKSGTKAFMEALQ 471
G EL I+I P+ GT+TI DTGIGMTK +L + LGTIA+SGT F++AL+
Sbjct: 138 GGELEIRIKPDPEAGTITITRSHCFASYSDTGIGMTKDELKDCLGTIAQSGTSKFLKALK 197
Query: 472 ----AGADISMIGQFGVGFYSSYLVADRVTVHSKH-NDDEQYVW 588
GAD +IGQFGVGFYS++LVA++V V +K D+QYVW
Sbjct: 198 ENKDLGADNGLIGQFGVGFYSAFLVAEKVVVSTKSPKADKQYVW 241
>08_02_0846 -
21811156-21811833,21811960-21812055,21812157-21812267,
21812367-21812743,21814699-21814734,21815236-21815839
Length = 633
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Frame = +1
Query: 376 IDTGIGMTKADLVNNLGT----IAKSGTKAFMEALQAG-ADISMIGQFGVG 513
++ GM+ A+L+ + I +SGTK E L+AG + ++G+ GVG
Sbjct: 100 VECAYGMSPAELLAKVAQFDALIVRSGTKVTREVLEAGRGRLRVVGRAGVG 150
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +3
Query: 324 RAVHQDHSQQERGHSYDHRYRYWYDQGRFGEQFGNHREIWY*SFHGGSSSRCRHQH 491
RA + + H +DHR+R+ G G+H +HGG R RH H
Sbjct: 525 RARRRHQKGRHHRHHHDHRHRH-------GHSHGDHHH----HYHGGHHQRRRHHH 569
>01_01_0188 - 1631006-1631017,1631171-1631307,1631934-1632033
Length = 82
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -1
Query: 434 AMVPKLFTKSALVIPIPVSMIVRVPSFLLGMILMYSSLPLSSFDGSVRDSYLILSKA 264
AM P L +S + P P S I+++ LG+ L+ +P D ++ +I KA
Sbjct: 24 AMTP-LHDRSRGIWPCPASAILKIYFHALGLFLLLICVPNGGADTGIQQLKIIKKKA 79
>06_03_0788 -
24603849-24603949,24604030-24604123,24604206-24604413,
24604727-24604839,24605679-24605816,24605916-24605999,
24606517-24606675,24606754-24606837,24607505-24607840,
24607941-24608042,24608970-24609153,24609699-24610044,
24610444-24610591,24611053-24611203,24611786-24611867,
24612314-24612362
Length = 792
Score = 28.3 bits (60), Expect = 4.8
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = +1
Query: 235 LRELISNSSDALDKIRYESLTDPSKLD-SGKELYIKIIPNKNEGTLTIIDTGIGMTKADL 411
+ ELI NS DA D S+L+ S K L+ K +K L++ID G GMT A++
Sbjct: 245 IAELIDNSRDA----------DASRLNISVKSLFSKKA-DKKIPVLSVIDDGHGMTCAEM 293
Query: 412 VNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGF 516
+ + K K + IG+FG+GF
Sbjct: 294 MRMISFGHKRPDKQRQD---------QIGRFGIGF 319
>09_03_0108 + 12421719-12421749,12422794-12422892,12423370-12423890
Length = 216
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -3
Query: 156 FNLRWLCLHFFRHFLYCFLFNSHKMTRGFLIHVFQSAKY 40
++L WLC F +Y + + K +RGF +F S ++
Sbjct: 151 WDLSWLCKPFGPLRMYHLVMRNSKFSRGFGYAIFSSRQH 189
>05_01_0019 -
129767-129931,130078-130257,130491-130728,130833-131236,
131284-131427,131709-131995,132071-132150,132563-132714,
132793-132909,133292-133450,133546-133946,134106-134423,
135050-135095,135203-135310
Length = 932
Score = 27.5 bits (58), Expect = 8.5
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3
Query: 528 VTGVEANTELSNHADVGTCLKSLH 457
++G + ELS H + G+CL+ H
Sbjct: 416 ISGPKFKVELSQHGEAGSCLRQQH 439
>03_03_0008 - 13674602-13674708,13675272-13675439,13676169-13676787,
13676868-13677330,13677855-13678036,13678093-13678235,
13678315-13678423,13679000-13679456,13680490-13682473,
13682507-13682626,13682920-13682971
Length = 1467
Score = 27.5 bits (58), Expect = 8.5
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 342 HSQQERGHSYDHRYRYWYDQGRFGEQFGNH 431
H +RG+ YD R ++ D+G + + G+H
Sbjct: 1316 HHFDDRGYHYDDRGYHYDDRGHYFDDRGHH 1345
>01_01_0175 - 1503254-1503575,1504398-1504657,1506162-1507028
Length = 482
Score = 27.5 bits (58), Expect = 8.5
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Frame = -3
Query: 573 VVIVFRVNSHAVSDQVTGVEANTELSNHADVGTCLKSLHESFSTRF----RDGSQIVHQI 406
V I R+N H + Q G E NT+LS K +H+ S R SQ +H++
Sbjct: 300 VSIGARLNRHNLHVQQLGPETNTQLSTF-HFSAQNKQIHDLHSKLILDHPRGRSQQIHRL 358
Query: 405 GLGHTNTGIDD 373
T GI D
Sbjct: 359 IASGTGNGIFD 369
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,408,099
Number of Sequences: 37544
Number of extensions: 333502
Number of successful extensions: 809
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1400060088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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