Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc21k14
(684 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X iso... 382 e-106
CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein. 382 e-106
BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein. 382 e-106
BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein. 382 e-106
BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4, X... 382 e-106
BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4, X... 382 e-106
AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X ... 382 e-106
AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4, X... 380 e-105
M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y iso... 373 e-103
BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4, Y... 373 e-103
BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4, Y... 373 e-103
AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y ... 373 e-103
BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein. 371 e-102
AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4, Y... 370 e-102
AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4 pr... 357 3e-98
BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein. 345 9e-95
M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar prot... 342 6e-94
Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4 prot... 113 7e-25
AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein. 32 1.7
AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens ... 31 3.8
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 31 5.0
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 31 5.0
AF005666-1|AAC51626.1| 469|Homo sapiens properdin protein. 30 6.7
AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta ch... 30 8.8
>M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X
isoform protein.
Length = 263
Score = 382 bits (940), Expect = e-106
Identities = 169/219 (77%), Positives = 195/219 (89%)
Frame = +1
Query: 28 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 207
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 208 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 387
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 388 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 567
YKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 568 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFA 684
CM+TGG NLGR+G I +RERHPGSFD+VH+KD+ G++FA
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFA 219
>CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein.
Length = 263
Score = 382 bits (940), Expect = e-106
Identities = 169/219 (77%), Positives = 195/219 (89%)
Frame = +1
Query: 28 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 207
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 208 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 387
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 388 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 567
YKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 568 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFA 684
CM+TGG NLGR+G I +RERHPGSFD+VH+KD+ G++FA
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFA 219
>BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 382 bits (940), Expect = e-106
Identities = 169/219 (77%), Positives = 195/219 (89%)
Frame = +1
Query: 28 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 207
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 208 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 387
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 388 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 567
YKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 568 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFA 684
CM+TGG NLGR+G I +RERHPGSFD+VH+KD+ G++FA
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFA 219
>BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 382 bits (940), Expect = e-106
Identities = 169/219 (77%), Positives = 195/219 (89%)
Frame = +1
Query: 28 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 207
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 208 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 387
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 388 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 567
YKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 568 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFA 684
CM+TGG NLGR+G I +RERHPGSFD+VH+KD+ G++FA
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFA 219
>BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 382 bits (940), Expect = e-106
Identities = 169/219 (77%), Positives = 195/219 (89%)
Frame = +1
Query: 28 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 207
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 208 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 387
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 388 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 567
YKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 568 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFA 684
CM+TGG NLGR+G I +RERHPGSFD+VH+KD+ G++FA
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFA 219
>BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 382 bits (940), Expect = e-106
Identities = 169/219 (77%), Positives = 195/219 (89%)
Frame = +1
Query: 28 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 207
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 208 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 387
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 388 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 567
YKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 568 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFA 684
CM+TGG NLGR+G I +RERHPGSFD+VH+KD+ G++FA
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFA 219
>AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X
isoform protein.
Length = 263
Score = 382 bits (940), Expect = e-106
Identities = 169/219 (77%), Positives = 195/219 (89%)
Frame = +1
Query: 28 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 207
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 208 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 387
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 388 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 567
YKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 568 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFA 684
CM+TGG NLGR+G I +RERHPGSFD+VH+KD+ G++FA
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFA 219
>AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4,
X-linked X isoform variant protein.
Length = 263
Score = 380 bits (935), Expect = e-105
Identities = 168/219 (76%), Positives = 194/219 (88%)
Frame = +1
Query: 28 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 207
MARGPKKHLKR+ APK WMLDKL GV+AP PSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 208 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 387
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 388 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 567
YKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 568 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFA 684
CM+TGG NLGR+G I +RERHPGSFD+VH+KD+ G++FA
Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFA 219
>M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y
isoform protein.
Length = 263
Score = 373 bits (918), Expect = e-103
Identities = 163/219 (74%), Positives = 193/219 (88%)
Frame = +1
Query: 28 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 207
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 208 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 387
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 388 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 567
YKLCKV+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNL
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 568 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFA 684
CM+ GG NLGRVG I +RERHPGSFD+VH+KD+ G++FA
Sbjct: 181 CMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFA 219
>BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 373 bits (918), Expect = e-103
Identities = 163/219 (74%), Positives = 193/219 (88%)
Frame = +1
Query: 28 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 207
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 208 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 387
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 388 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 567
YKLCKV+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNL
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 568 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFA 684
CM+ GG NLGRVG I +RERHPGSFD+VH+KD+ G++FA
Sbjct: 181 CMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFA 219
>BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 373 bits (918), Expect = e-103
Identities = 163/219 (74%), Positives = 193/219 (88%)
Frame = +1
Query: 28 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 207
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 208 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 387
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 388 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 567
YKLCKV+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNL
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 568 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFA 684
CM+ GG NLGRVG I +RERHPGSFD+VH+KD+ G++FA
Sbjct: 181 CMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFA 219
>AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y
isoform protein.
Length = 263
Score = 373 bits (918), Expect = e-103
Identities = 163/219 (74%), Positives = 193/219 (88%)
Frame = +1
Query: 28 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 207
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 208 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 387
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 388 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 567
YKLCKV+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNL
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 568 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFA 684
CM+ GG NLGRVG I +RERHPGSFD+VH+KD+ G++FA
Sbjct: 181 CMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFA 219
>BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein.
Length = 262
Score = 371 bits (913), Expect = e-102
Identities = 162/218 (74%), Positives = 192/218 (88%)
Frame = +1
Query: 31 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEV 210
ARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV
Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEV 60
Query: 211 LKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKY 390
KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKY
Sbjct: 61 KKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKY 120
Query: 391 KLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLC 570
KLCKV+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNLC
Sbjct: 121 KLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLC 180
Query: 571 MITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFA 684
M+ GG NLGRVG I +RERHPGSFD+VH+KD+ G++FA
Sbjct: 181 MVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFA 218
>AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 Y isoform variant protein.
Length = 263
Score = 370 bits (911), Expect = e-102
Identities = 162/219 (73%), Positives = 192/219 (87%)
Frame = +1
Query: 28 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 207
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 208 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 387
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 388 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 567
YKLCKV+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNL
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 568 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFA 684
CM+ GG NLGRVG I +RERHPGSF +VH+KD+ G++FA
Sbjct: 181 CMVIGGANLGRVGVITNRERHPGSFGVVHVKDANGNSFA 219
>AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4
protein.
Length = 263
Score = 357 bits (877), Expect = 3e-98
Identities = 156/219 (71%), Positives = 187/219 (85%)
Frame = +1
Query: 28 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 207
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 208 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 387
V KI Q +K+DGKVR D TYPAGF+DV+SIEKT E FRL+Y+ KG F +HRIT EEAK
Sbjct: 61 VKKICMQHFLKIDGKVRVDITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAK 120
Query: 388 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 567
YKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND++Q+D+ T KI FIKF++GN+
Sbjct: 121 YKLCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNV 180
Query: 568 CMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFA 684
CM+ G NLGRVG I +RERHPGS D+VH+KD+ G++FA
Sbjct: 181 CMVIAGANLGRVGVITNRERHPGSCDVVHVKDANGNSFA 219
>BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein.
Length = 243
Score = 345 bits (848), Expect = 9e-95
Identities = 152/199 (76%), Positives = 177/199 (88%)
Frame = +1
Query: 88 DKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDP 267
DKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD
Sbjct: 1 DKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDI 60
Query: 268 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLV 447
TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K +P+LV
Sbjct: 61 TYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLV 120
Query: 448 THDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRER 627
THD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G I +RER
Sbjct: 121 THDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRER 180
Query: 628 HPGSFDIVHIKDSTGHTFA 684
HPGSFD+VH+KD+ G++FA
Sbjct: 181 HPGSFDVVHVKDANGNSFA 199
>M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar protein
mRNA, complete cds. ).
Length = 244
Score = 342 bits (841), Expect = 6e-94
Identities = 153/201 (76%), Positives = 178/201 (88%)
Frame = +1
Query: 82 MLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRT 261
MLDKL GV+APRPS GPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRT
Sbjct: 1 MLDKLTGVFAPRPS-GPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 59
Query: 262 DPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPY 441
D TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K +P+
Sbjct: 60 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 119
Query: 442 LVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSR 621
LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G I +R
Sbjct: 120 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 179
Query: 622 ERHPGSFDIVHIKDSTGHTFA 684
ERHPGSFD+VH+KD+ G++FA
Sbjct: 180 ERHPGSFDVVHVKDANGNSFA 200
>Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4
protein.
Length = 59
Score = 113 bits (271), Expect = 7e-25
Identities = 50/56 (89%), Positives = 53/56 (94%)
Frame = +1
Query: 28 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYAL 195
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYAL
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYAL 56
>AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein.
Length = 182
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +1
Query: 268 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 414
+YPA + D I + E+FRL+ + + RI + K C ++RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRRICASASAPKTCSIERV 144
>AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens
cDNA FLJ14103 fis, clone MAMMA1001073. ).
Length = 182
Score = 31.1 bits (67), Expect = 3.8
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 268 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 414
+YPA + D I + E+FRL+ + + +I + K C ++RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRKICASASAPKTCSIERV 144
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens
cDNA FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 30.7 bits (66), Expect = 5.0
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +1
Query: 109 APRPSTGPHKLRECLPL----VIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYP 276
A +P P +E PL + +++Y L E+ KQRLIK D +++T + P
Sbjct: 12 ASKPKVPPKSEKENDPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSD-QLKTSSSSP 70
Query: 277 AGF-MDVVSIEKTNELFRLIYDVKGRFTIHRI 369
A +++ I + + + + D + + HRI
Sbjct: 71 ANSDVEIDGIGRIAMVTKQVTDAESKLKKHRI 102
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 30.7 bits (66), Expect = 5.0
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +1
Query: 109 APRPSTGPHKLRECLPL----VIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYP 276
A +P P +E PL + +++Y L E+ KQRLIK D +++T + P
Sbjct: 757 ASKPKVPPKSEKENDPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSD-QLKTSSSSP 815
Query: 277 AGF-MDVVSIEKTNELFRLIYDVKGRFTIHRI 369
A +++ I + + + + D + + HRI
Sbjct: 816 ANSDVEIDGIGRIAMVTKQVTDAESKLKKHRI 847
>AF005666-1|AAC51626.1| 469|Homo sapiens properdin protein.
Length = 469
Score = 30.3 bits (65), Expect = 6.7
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 590 TWGVWAPSCPARDIPAPSTLCTSRTPRDTPS 682
TWG+ P C A LCT P+D P+
Sbjct: 387 TWGLCMPPCGPNPTRARQRLCTPLLPKDPPT 417
>AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta chain
VJ region protein.
Length = 76
Score = 29.9 bits (64), Expect = 8.8
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 259 TDPTYPAGFM-DVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATG 423
++ TY +GF+ D I + N F + T+ ++PE++ LC V RV TG
Sbjct: 10 SEATYESGFVIDKFPISRPNLTFSTL-------TVSNMSPEDSSIYLCSVLRVVTG 58
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,999,111
Number of Sequences: 237096
Number of extensions: 2528028
Number of successful extensions: 15549
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 15220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15541
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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