BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc21k06
(451 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 29 0.031
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 29 0.031
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 29 0.031
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 29 0.031
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 29 0.031
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 29 0.031
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 29 0.031
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 29 0.031
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 29 0.031
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 29 0.031
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 28 0.041
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 26 0.17
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 26 0.17
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 26 0.17
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 26 0.17
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 26 0.17
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 1.2
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 1.2
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 2.0
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 2.0
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 2.0
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 2.0
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 2.0
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 2.0
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 23 2.0
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 2.0
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 4.7
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 4.7
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 6.2
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 21 6.2
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 8.2
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 21 8.2
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 28.7 bits (61), Expect = 0.031
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +2
Query: 104 RFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSS----YNKSNMDQLIAIVNFLE 271
+++ K N E++ S E + N L N ++ YNK N ++L +N++E
Sbjct: 58 KYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIE 117
Query: 272 K 274
+
Sbjct: 118 Q 118
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 28.7 bits (61), Expect = 0.031
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +2
Query: 104 RFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSS----YNKSNMDQLIAIVNFLE 271
+++ K N E++ S E + N L N ++ YNK N ++L +N++E
Sbjct: 58 KYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIE 117
Query: 272 K 274
+
Sbjct: 118 Q 118
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 28.7 bits (61), Expect = 0.031
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +2
Query: 104 RFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSS----YNKSNMDQLIAIVNFLE 271
+++ K N E++ S E + N L N ++ YNK N ++L +N++E
Sbjct: 58 KYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIE 117
Query: 272 K 274
+
Sbjct: 118 Q 118
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 28.7 bits (61), Expect = 0.031
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +2
Query: 104 RFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSS----YNKSNMDQLIAIVNFLE 271
+++ K N E++ S E + N L N ++ YNK N ++L +N++E
Sbjct: 58 KYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIE 117
Query: 272 K 274
+
Sbjct: 118 Q 118
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 28.7 bits (61), Expect = 0.031
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +2
Query: 104 RFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSS----YNKSNMDQLIAIVNFLE 271
+++ K N E++ S E + N L N ++ YNK N ++L +N++E
Sbjct: 58 KYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIE 117
Query: 272 K 274
+
Sbjct: 118 Q 118
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 28.7 bits (61), Expect = 0.031
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +2
Query: 104 RFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSS----YNKSNMDQLIAIVNFLE 271
+++ K N E++ S E + N L N ++ YNK N ++L +N++E
Sbjct: 58 KYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIE 117
Query: 272 K 274
+
Sbjct: 118 Q 118
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 28.7 bits (61), Expect = 0.031
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +2
Query: 104 RFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSS----YNKSNMDQLIAIVNFLE 271
+++ K N E++ S E + N L N ++ YNK N ++L +N++E
Sbjct: 58 KYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIE 117
Query: 272 K 274
+
Sbjct: 118 Q 118
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 28.7 bits (61), Expect = 0.031
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +2
Query: 104 RFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSS----YNKSNMDQLIAIVNFLE 271
+++ K N E++ S E + N L N ++ YNK N ++L +N++E
Sbjct: 58 KYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIE 117
Query: 272 K 274
+
Sbjct: 118 Q 118
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 28.7 bits (61), Expect = 0.031
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +2
Query: 104 RFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSS----YNKSNMDQLIAIVNFLE 271
+++ K N E++ S E + N L N ++ YNK N ++L +N++E
Sbjct: 291 KYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIE 350
Query: 272 K 274
+
Sbjct: 351 Q 351
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 28.7 bits (61), Expect = 0.031
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +2
Query: 104 RFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSS----YNKSNMDQLIAIVNFLE 271
+++ K N E++ S E + N L N ++ YNK N ++L +N++E
Sbjct: 291 KYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIE 350
Query: 272 K 274
+
Sbjct: 351 Q 351
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 28.3 bits (60), Expect = 0.041
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +2
Query: 104 RFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSS----YNKSNMDQLIAIVNFLE 271
+++ K N E++ S E + N L N ++ YNK N ++L +N++E
Sbjct: 58 KYRETSKERSRNRTERERSKEPKIISNNNPLSNNYNYNNNYNNYNKHNYNKLYYNINYIE 117
Query: 272 K 274
+
Sbjct: 118 Q 118
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 26.2 bits (55), Expect = 0.17
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +2
Query: 104 RFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEK 274
+++ K + E++ S E + L N S+YN +N QL +N++E+
Sbjct: 58 KYRKTSKERSRDRTERERSKEPKII---SSLSNNYNYSNYNNNNYKQLCYNINYIEQ 111
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 26.2 bits (55), Expect = 0.17
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +2
Query: 104 RFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEK 274
+++ K + E++ S E + L N S+YN +N QL +N++E+
Sbjct: 58 KYRKTSKERSRDRTERERSKEPKII---SSLSNNYNYSNYNNNNYKQLCYNINYIEQ 111
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 26.2 bits (55), Expect = 0.17
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +2
Query: 104 RFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEK 274
+++ K + E++ S E + L N S+YN +N QL +N++E+
Sbjct: 58 KYRKTSKERSRDRTERERSKEPKII---SSLSNNYNYSNYNNNNYKQLCYNINYIEQ 111
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 26.2 bits (55), Expect = 0.17
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +2
Query: 104 RFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEK 274
+++ K + E++ S E + L N S+YN +N QL +N++E+
Sbjct: 58 KYRKTSKERSRDRTERERSKEPKII---SSLSNNYNYSNYNNNNYKQLCYNINYIEQ 111
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 26.2 bits (55), Expect = 0.17
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +2
Query: 104 RFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEK 274
+++ K + E++ S E + L N S+YN +N QL +N++E+
Sbjct: 58 KYRKTSKERSRDRTERERSKEPKII---SSLSNNYNYSNYNNNNYKQLCYNINYIEQ 111
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.4 bits (48), Expect = 1.2
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +1
Query: 37 FITNELPGCWALKKYIIKNTSGSFQRFTKIKHGKHAGA 150
F+ E G WA KY + RF + K GK +GA
Sbjct: 1016 FVFRESVGAWAYSKYGL--------RFLRAKPGKSSGA 1045
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 23.4 bits (48), Expect = 1.2
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -1
Query: 346 LLAFGHFAFVLHDRHYVEDIVNVLFFQEIYNSN 248
LL + H + D H E +V+++F N+N
Sbjct: 218 LLLYNHARLMSQDNHSKEYLVSIMFSHYDRNNN 250
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 2.0
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +2
Query: 92 IQAGRFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESS 217
++ R K L K + PE + + + K L KLESS
Sbjct: 65 LRRAREKKLSKRSKSRSPESRGRSNASNTSKTFILSEKLESS 106
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 2.0
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +2
Query: 92 IQAGRFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESS 217
++ R K L K + PE + + + K L KLESS
Sbjct: 65 LRRAREKKLSKRSKSRSPESRGRSNASNTSKTFILSEKLESS 106
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 2.0
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +2
Query: 92 IQAGRFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESS 217
++ R K L K + PE + + + K L KLESS
Sbjct: 65 LRRAREKKLSKRSKSRSPESRGRSNASNTSKTFILSEKLESS 106
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 2.0
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +2
Query: 92 IQAGRFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESS 217
++ R K L K + PE + + + K L KLESS
Sbjct: 65 LRRAREKKLSKRSKSRSPESRGRSNASNTSKTFILSEKLESS 106
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 2.0
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +2
Query: 92 IQAGRFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESS 217
++ R K L K + PE + + + K L KLESS
Sbjct: 65 LRRAREKKLSKRSKSRSPESRGRSNASNTSKTFILSEKLESS 106
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 2.0
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +2
Query: 92 IQAGRFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESS 217
++ R K L K + PE + + + K L KLESS
Sbjct: 65 LRRAREKKLSKRSKSRSPESRGRSNASNTSKTFILSEKLESS 106
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.6 bits (46), Expect = 2.0
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +2
Query: 92 IQAGRFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESS 217
++ R K L K + PE + + + K L KLESS
Sbjct: 65 LRRAREKKLSKRSKSRSPESRGRSNASNTSKTFILSEKLESS 106
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.6 bits (46), Expect = 2.0
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +2
Query: 92 IQAGRFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESS 217
++ R K L K + PE + + + K L KLESS
Sbjct: 65 LRRAREKKLSKRSKSRSPESRGRSNASNTSKTFILSEKLESS 106
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 4.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 143 PEQQSSTETAAVCKNEKLLNKLESS 217
P+ + + T+ K L NKLESS
Sbjct: 85 PDSRDRSSTSNTSKTVILSNKLESS 109
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 4.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 143 PEQQSSTETAAVCKNEKLLNKLESS 217
P+ + + T+ K L NKLESS
Sbjct: 85 PDSRDRSNTSNTSKTVILSNKLESS 109
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.0 bits (42), Expect = 6.2
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 143 PEQQSSTETAAVCKNEKLLNKLESS 217
P+ + + T+ K L NKLESS
Sbjct: 85 PDSRDRSNTSNTSKTIILSNKLESS 109
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 21.0 bits (42), Expect = 6.2
Identities = 10/30 (33%), Positives = 12/30 (40%)
Frame = -2
Query: 162 VEDCCSGMFTMFDFCKPLKRPACILDDIFF 73
V CS F P K P +L D+ F
Sbjct: 49 VLSACSPYFRELLKSTPCKHPVIVLQDVAF 78
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 20.6 bits (41), Expect = 8.2
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +2
Query: 305 PVMQDERKMSKRKKKVINNNKY 370
P ++RK+S INN++Y
Sbjct: 432 PKKDNKRKLSDSTMNKINNHEY 453
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 20.6 bits (41), Expect = 8.2
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = +2
Query: 299 VMPVMQDERKMSKRKKKVINNNKYIL 376
++P+ D+ +RK++ INN++ L
Sbjct: 322 MLPLGADDPDSLRRKRQKINNSQNAL 347
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,314
Number of Sequences: 438
Number of extensions: 2861
Number of successful extensions: 33
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -