Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc21i22
(384 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC130398-1|AAI30399.1| 912|Homo sapiens USP29 protein protein. 33 0.24
BC130394-1|AAI30395.1| 912|Homo sapiens USP29 protein protein. 33 0.24
AF229438-1|AAG10401.1| 922|Homo sapiens ubiquitin-specific proc... 33 0.24
Y14385-1|CAA74743.1| 1258|Homo sapiens inositol polyphosphate 5-... 33 0.31
L36818-1|AAA96658.1| 1149|Homo sapiens 51C protein protein. 33 0.31
BC032579-1|AAH32579.1| 297|Homo sapiens orthodenticle homeobox ... 29 6.8
AF298117-1|AAG16243.1| 297|Homo sapiens homeobox protein OTX2 p... 29 6.8
BC034495-1|AAH34495.2| 870|Homo sapiens radial spoke head 10 ho... 28 8.9
AF495911-1|AAN60443.1| 6884|Homo sapiens nesprin-2 protein. 28 8.9
AF435011-1|AAL33548.1| 6885|Homo sapiens NUANCE protein. 28 8.9
>BC130398-1|AAI30399.1| 912|Homo sapiens USP29 protein protein.
Length = 912
Score = 33.5 bits (73), Expect = 0.24
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Frame = -2
Query: 203 LNSVKKVRPLPSTIKLWLKYF---ENKKHNESISSRNNCASKHTFSKRSYVLNLKL 45
+N ++ +PLP +I+ L F E ++N + + +C ++HTFS+ S VL + L
Sbjct: 456 INLHQETKPLPLSIQNSLDLFFKEEELEYNCQMCKQKSCVARHTFSRLSRVLIIHL 511
>BC130394-1|AAI30395.1| 912|Homo sapiens USP29 protein protein.
Length = 912
Score = 33.5 bits (73), Expect = 0.24
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Frame = -2
Query: 203 LNSVKKVRPLPSTIKLWLKYF---ENKKHNESISSRNNCASKHTFSKRSYVLNLKL 45
+N ++ +PLP +I+ L F E ++N + + +C ++HTFS+ S VL + L
Sbjct: 456 INLHQETKPLPLSIQNSLDLFFKEEELEYNCQMCKQKSCVARHTFSRLSRVLIIHL 511
>AF229438-1|AAG10401.1| 922|Homo sapiens ubiquitin-specific
processing protease protein.
Length = 922
Score = 33.5 bits (73), Expect = 0.24
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Frame = -2
Query: 203 LNSVKKVRPLPSTIKLWLKYF---ENKKHNESISSRNNCASKHTFSKRSYVLNLKL 45
+N ++ +PLP +I+ L F E ++N + + +C ++HTFS+ S VL + L
Sbjct: 456 INLHQETKPLPLSIQNSLDLFFKEEELEYNCQMCKQKSCVARHTFSRLSRVLIIHL 511
>Y14385-1|CAA74743.1| 1258|Homo sapiens inositol polyphosphate
5-phosphatase protein.
Length = 1258
Score = 33.1 bits (72), Expect = 0.31
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 154 QSLIVDGKGLTFFTEF-NKCIVSIKSSFENQANNTDNIHNVK 276
++++ FF EF + C+ K SFEN A ++DNI+ +K
Sbjct: 754 EAIVKTASRTKFFIEFYSTCLEEYKKSFENDAQSSDNINFLK 795
>L36818-1|AAA96658.1| 1149|Homo sapiens 51C protein protein.
Length = 1149
Score = 33.1 bits (72), Expect = 0.31
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 154 QSLIVDGKGLTFFTEF-NKCIVSIKSSFENQANNTDNIHNVK 276
++++ FF EF + C+ K SFEN A ++DNI+ +K
Sbjct: 690 EAIVKTASRTKFFIEFYSTCLEEYKKSFENDAQSSDNINFLK 731
>BC032579-1|AAH32579.1| 297|Homo sapiens orthodenticle homeobox 2
protein.
Length = 297
Score = 28.7 bits (61), Expect = 6.8
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Frame = -2
Query: 326 WGTCLMNSSRKNI-EKMFFTLCMLSVLLA*FSKLLFMETIHLLNSVKKVRPLPSTIKLWL 150
W +C + RK E+ FT L VL A F+K + + K+ S +++W
Sbjct: 35 WASCPAATPRKQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWF 94
Query: 149 KYFENKKHNESISSRNNCASK 87
K K + +N +K
Sbjct: 95 KNRRAKCRQQQQQQQNGGQNK 115
>AF298117-1|AAG16243.1| 297|Homo sapiens homeobox protein OTX2
protein.
Length = 297
Score = 28.7 bits (61), Expect = 6.8
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Frame = -2
Query: 326 WGTCLMNSSRKNI-EKMFFTLCMLSVLLA*FSKLLFMETIHLLNSVKKVRPLPSTIKLWL 150
W +C + RK E+ FT L VL A F+K + + K+ S +++W
Sbjct: 35 WASCPAATPRKQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWF 94
Query: 149 KYFENKKHNESISSRNNCASK 87
K K + +N +K
Sbjct: 95 KNRRAKCRQQQQQQQNGGQNK 115
>BC034495-1|AAH34495.2| 870|Homo sapiens radial spoke head 10
homolog B (Chlamydomonas) protein.
Length = 870
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +1
Query: 172 GKGLTFFTEFNKCIVSIKSSFENQAN---NTDNIHNVKNIFSIFLRDEFIKQ 318
GKG+TFF+ +K K E + N N + V +F + R+E IK+
Sbjct: 734 GKGITFFSSESKKYERPKDDREEEFNTWVNNMYVFFVNTLFHAYKREEAIKE 785
>AF495911-1|AAN60443.1| 6884|Homo sapiens nesprin-2 protein.
Length = 6884
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -2
Query: 215 TIHLLNSVKKVRPLPSTIKLWLKYFENKKHN 123
++H+LN +K P I L +K+ +N+K N
Sbjct: 3160 SLHVLNQIKSQLQQPLLINLEIKHIQNEKDN 3190
>AF435011-1|AAL33548.1| 6885|Homo sapiens NUANCE protein.
Length = 6885
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -2
Query: 215 TIHLLNSVKKVRPLPSTIKLWLKYFENKKHN 123
++H+LN +K P I L +K+ +N+K N
Sbjct: 3161 SLHVLNQIKSQLQQPLLINLEIKHIQNEKDN 3191
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,054,966
Number of Sequences: 237096
Number of extensions: 898479
Number of successful extensions: 6101
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6101
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2583773550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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