Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc21i03
         (669 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    23   2.0  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    23   2.0  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   2.0  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   2.6  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    23   3.5  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   3.5  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    22   4.6  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   8.0  

>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +1

Query: 205 KEKRQKWDKKSEQCILIGYPEDVKGYRIYNPAAQSITTSRDV 330
           K K+  +D     CI  G      G  IY P A++ T   D+
Sbjct: 23  KTKKTSFDSTLLDCIQSGIENLDSGVGIYAPDAEAYTLFADL 64


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +1

Query: 205 KEKRQKWDKKSEQCILIGYPEDVKGYRIYNPAAQSITTSRDV 330
           K K+  +D     CI  G      G  IY P A++ T   D+
Sbjct: 39  KTKKTSFDSTLLDCIQSGIENLDSGVGIYAPDAEAYTLFADL 80


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/49 (22%), Positives = 23/49 (46%)
 Frame = +1

Query: 55  LCERMNRTIVQNRIVKTGLNNRTPYEVWTGTKPNLSHLRILGSAVMKHI 201
           LC+     +++      GL+ RT   +W       +++ +L S  MK++
Sbjct: 309 LCDVQRYNLLETIATHMGLDTRTSTSLWKDKAMIEANVAVLHSFQMKNV 357


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 600 YIHICQVAFCAFSVLFSEKDIFSNFKDSS 514
           Y H+ ++    F +  SE D F+N  D S
Sbjct: 48  YDHLKEIVIGGFEIEKSEDDSFNNQADKS 76


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
          protein.
          Length = 139

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 81 NCSVHPLTESILFW 40
          NC +HP   S+LFW
Sbjct: 37 NC-IHPTVFSVLFW 49


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 81  NCSVHPLTESILFW 40
           NC +HP   S+LFW
Sbjct: 485 NC-IHPTVFSVLFW 497


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 218 KNGTKSLNNAYL*AILRMLRDTV 286
           +N T S++N+Y    +  L+DTV
Sbjct: 168 ENNTCSISNSYTNGCVEALKDTV 190


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/34 (20%), Positives = 17/34 (50%)
 Frame = +1

Query: 43  EQNGLCERMNRTIVQNRIVKTGLNNRTPYEVWTG 144
           + NGL +    ++  + + ++ +  R+P   W G
Sbjct: 889 QSNGLNDPTTVSLAVDTVARSNVTPRSPGRAWPG 922


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,228
Number of Sequences: 438
Number of extensions: 3707
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)