Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc21g21
         (358 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC001947-1|AAH01947.1|  341|Homo sapiens CD2 (cytoplasmic tail) ...    28   9.8  
BC000495-1|AAH00495.1|  341|Homo sapiens CD2 (cytoplasmic tail) ...    28   9.8  
AF104222-1|AAC84141.1|  341|Homo sapiens CD2 cytoplasmic domain ...    28   9.8  
AB033004-1|BAA86492.1|  124|Homo sapiens KIAA1178 protein protein.     28   9.8  

>BC001947-1|AAH01947.1|  341|Homo sapiens CD2 (cytoplasmic tail)
           binding protein 2 protein.
          Length = 341

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -1

Query: 271 MYKYVSEVY-QDHVFCRELAPTSRQYYST 188
           M  +VSE Y  D V+CR+L P   Q+Y++
Sbjct: 304 MQTWVSEGYFPDGVYCRKLDPPGGQFYNS 332


>BC000495-1|AAH00495.1|  341|Homo sapiens CD2 (cytoplasmic tail)
           binding protein 2 protein.
          Length = 341

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -1

Query: 271 MYKYVSEVY-QDHVFCRELAPTSRQYYST 188
           M  +VSE Y  D V+CR+L P   Q+Y++
Sbjct: 304 MQTWVSEGYFPDGVYCRKLDPPGGQFYNS 332


>AF104222-1|AAC84141.1|  341|Homo sapiens CD2 cytoplasmic domain
           binding protein protein.
          Length = 341

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -1

Query: 271 MYKYVSEVY-QDHVFCRELAPTSRQYYST 188
           M  +VSE Y  D V+CR+L P   Q+Y++
Sbjct: 304 MQTWVSEGYFPDGVYCRKLDPPGGQFYNS 332


>AB033004-1|BAA86492.1|  124|Homo sapiens KIAA1178 protein protein.
          Length = 124

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -1

Query: 271 MYKYVSEVY-QDHVFCRELAPTSRQYYST 188
           M  +VSE Y  D V+CR+L P   Q+Y++
Sbjct: 87  MQTWVSEGYFPDGVYCRKLDPPGGQFYNS 115


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,392,426
Number of Sequences: 237096
Number of extensions: 762793
Number of successful extensions: 2132
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2132
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)