Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc21g21
         (358 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23450-6|AAK31469.1|  790|Caenorhabditis elegans Hypothetical pr...    29   0.72 
AL117195-2|CAB60773.1|  245|Caenorhabditis elegans Hypothetical ...    29   1.3  
AL032644-5|CAA21669.2|  517|Caenorhabditis elegans Hypothetical ...    27   3.9  
Z11126-7|CAO82061.1|  522|Caenorhabditis elegans Hypothetical pr...    26   6.7  
Z11126-6|CAA77471.2|  480|Caenorhabditis elegans Hypothetical pr...    26   6.7  
AF026212-1|AAF99971.1|  807|Caenorhabditis elegans Hypothetical ...    26   6.7  
Z73098-12|CAA97339.1|  452|Caenorhabditis elegans Hypothetical p...    26   8.9  
Z68005-4|CAA91992.2|  430|Caenorhabditis elegans Hypothetical pr...    26   8.9  

>U23450-6|AAK31469.1|  790|Caenorhabditis elegans Hypothetical
           protein C30B5.5 protein.
          Length = 790

 Score = 29.5 bits (63), Expect = 0.72
 Identities = 21/64 (32%), Positives = 32/64 (50%)
 Frame = -1

Query: 208 SRQYYSTLFYCNFQRIIKHILTFCQ*T*NLLYFSQYFNAVITITTEKILK*AQI*TTSDS 29
           S + Y +LF     +I+ +IL   + T  +LY  +YF+    I  E I+K A     SD 
Sbjct: 501 SIKIYLSLFNAQKMKILVNILILIRITSGMLYDGKYFDMKDRIRAECIIKKAM----SDY 556

Query: 28  RYFG 17
           +Y G
Sbjct: 557 KYLG 560


>AL117195-2|CAB60773.1|  245|Caenorhabditis elegans Hypothetical
           protein Y57A10A.3 protein.
          Length = 245

 Score = 28.7 bits (61), Expect = 1.3
 Identities = 21/69 (30%), Positives = 31/69 (44%)
 Frame = -1

Query: 265 KYVSEVYQDHVFCRELAPTSRQYYSTLFYCNFQRIIKHILTFCQ*T*NLLYFSQYFNAVI 86
           K  S++ Q    C   +    + YS  F  N +  I H   F +   NLLYFS  F+ +I
Sbjct: 174 KLTSQILQRRFSCTATSAMLSKTYSPQFLNNSK--ISHCFFFAKLP-NLLYFSVIFSLII 230

Query: 85  TITTEKILK 59
            I    +L+
Sbjct: 231 VIAPFFVLQ 239


>AL032644-5|CAA21669.2|  517|Caenorhabditis elegans Hypothetical
           protein Y51H1A.5 protein.
          Length = 517

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -2

Query: 219 WPRRADSIIRHCFIVTFNA*LNTFSLSVNELEIYCIFRNILMP 91
           WP    + I H +  T N  LNT  L+  + + + +F +I++P
Sbjct: 206 WPNMPQTGIYHNYKNTINLPLNTIGLT--DADYHALFTHIILP 246


>Z11126-7|CAO82061.1|  522|Caenorhabditis elegans Hypothetical
           protein ZK643.3b protein.
          Length = 522

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -1

Query: 304 HILTESYFQHTMYKYVSEVYQDHVFCRELAPTSRQY 197
           +++T S F        S+V+Q+H+FCR L     +Y
Sbjct: 273 YLITVSLFVVNDAPLSSQVFQNHLFCRLLFSIQLRY 308


>Z11126-6|CAA77471.2|  480|Caenorhabditis elegans Hypothetical
           protein ZK643.3a protein.
          Length = 480

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -1

Query: 304 HILTESYFQHTMYKYVSEVYQDHVFCRELAPTSRQY 197
           +++T S F        S+V+Q+H+FCR L     +Y
Sbjct: 273 YLITVSLFVVNDAPLSSQVFQNHLFCRLLFSIQLRY 308


>AF026212-1|AAF99971.1|  807|Caenorhabditis elegans Hypothetical
           protein F52G3.3 protein.
          Length = 807

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3

Query: 146 HFLSMNLKFIVFFAIF 99
           H LS+NLKF  F+ IF
Sbjct: 380 HHLSLNLKFFFFYKIF 395


>Z73098-12|CAA97339.1|  452|Caenorhabditis elegans Hypothetical
           protein T21C9.12 protein.
          Length = 452

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = +2

Query: 221 LPAKYVVLVDLRNVLVH 271
           L  KY ++++L+N+LVH
Sbjct: 244 LQPKYTIVIELKNILVH 260


>Z68005-4|CAA91992.2|  430|Caenorhabditis elegans Hypothetical
           protein F59F3.2 protein.
          Length = 430

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -3

Query: 311 GRTYFNGVLLSAHHVQVRFGGLPGPRILPGA 219
           GRT   G    A    V+  GLPGP+ LPG+
Sbjct: 204 GRTGSKGDPGEAGQDFVQLNGLPGPKGLPGS 234


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,544,498
Number of Sequences: 27780
Number of extensions: 139423
Number of successful extensions: 304
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 304
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)