Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc21g20
         (484 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC106877-1|AAI06878.1|  663|Homo sapiens chromosome 1 open readi...    29   6.5  
AK001763-1|BAA91892.1|  663|Homo sapiens protein ( Homo sapiens ...    29   6.5  
AK001583-1|BAA91771.1|  220|Homo sapiens protein ( Homo sapiens ...    29   6.5  
BC041761-1|AAH41761.2|  792|Homo sapiens DOCK5 protein protein.        29   8.6  
AK126024-1|BAC86398.1|  166|Homo sapiens protein ( Homo sapiens ...    29   8.6  
AK024687-1|BAB14962.1|  274|Homo sapiens protein ( Homo sapiens ...    29   8.6  

>BC106877-1|AAI06878.1|  663|Homo sapiens chromosome 1 open reading
           frame 106 protein.
          Length = 663

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
 Frame = +3

Query: 78  VAATRPLPPDRGAASRAAPYSRL-GDGRVLRYSSVAPPATLHTRGEESSPSPALR 239
           V A  PLPP      RAAP      +G  LRY  + P  +   R      SPA R
Sbjct: 524 VVAESPLPPGEWELCRAAPGPAYEEEGTPLRYQRLVPSRSRIVRTPSLKDSPAGR 578


>AK001763-1|BAA91892.1|  663|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10901 fis, clone NT2RP5003524. ).
          Length = 663

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
 Frame = +3

Query: 78  VAATRPLPPDRGAASRAAPYSRL-GDGRVLRYSSVAPPATLHTRGEESSPSPALR 239
           V A  PLPP      RAAP      +G  LRY  + P  +   R      SPA R
Sbjct: 524 VVAESPLPPGEWELCRAAPGPAYEEEGTPLRYQRLVPSRSRIVRTPSLKDSPAGR 578


>AK001583-1|BAA91771.1|  220|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10721 fis, clone NT2RP3001133. ).
          Length = 220

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
 Frame = +3

Query: 78  VAATRPLPPDRGAASRAAPYSRL-GDGRVLRYSSVAPPATLHTRGEESSPSPALR 239
           V A  PLPP      RAAP      +G  LRY  + P  +   R      SPA R
Sbjct: 81  VVAESPLPPGEWELRRAAPGPAYEEEGTPLRYQRLVPSRSRIVRTPSLKDSPAGR 135


>BC041761-1|AAH41761.2|  792|Homo sapiens DOCK5 protein protein.
          Length = 792

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 27/72 (37%), Positives = 35/72 (48%)
 Frame = +3

Query: 15  PPVGPHATRYS*SPRG*TVSSVAATRPLPPDRGAASRAAPYSRLGDGRVLRYSSVAPPAT 194
           PP+ P ATR   SP   T   +AAT P+PP     S+  PY    +G     + +APP  
Sbjct: 713 PPLTPKATRTLSSPSLQT-DGIAAT-PVPPPPPPKSK--PY----EGSQRNSTELAPP-- 762

Query: 195 LHTRGEESSPSP 230
           L  R E  +P P
Sbjct: 763 LPVRREAKAPPP 774


>AK126024-1|BAC86398.1|  166|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44036 fis, clone TESTI4028809. ).
          Length = 166

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = -1

Query: 202 VCNVAGGATLEYRSTRPSPRREYGAARLAAPRSGGRGRVAA 80
           VC +A   ++ +R  R  PR  +G+A + A   GGRGR ++
Sbjct: 110 VC-LARDVSIPHRQGRCLPRSPWGSAGVNAALQGGRGRASS 149


>AK024687-1|BAB14962.1|  274|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21034 fis, clone CAE09073. ).
          Length = 274

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 27/72 (37%), Positives = 35/72 (48%)
 Frame = +3

Query: 15  PPVGPHATRYS*SPRG*TVSSVAATRPLPPDRGAASRAAPYSRLGDGRVLRYSSVAPPAT 194
           PP+ P ATR   SP   T   +AAT P+PP     S+  PY    +G     + +APP  
Sbjct: 195 PPLTPKATRTLSSPSLQT-DGIAAT-PVPPPPPPKSK--PY----EGSQRNSTELAPP-- 244

Query: 195 LHTRGEESSPSP 230
           L  R E  +P P
Sbjct: 245 LPVRREAKAPPP 256


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,590,706
Number of Sequences: 237096
Number of extensions: 1415325
Number of successful extensions: 4815
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4810
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)