Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc21g17
(440 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 29 0.017
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 29 0.017
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 26 0.21
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 23 1.1
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 23 1.1
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 23 1.1
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 23 1.1
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 23 2.0
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 22 2.6
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 3.4
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 22 3.4
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 21 4.5
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 6.0
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 21 7.9
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 21 7.9
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 7.9
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 7.9
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 7.9
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 21 7.9
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 21 7.9
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 29.5 bits (63), Expect = 0.017
Identities = 10/38 (26%), Positives = 24/38 (63%)
Frame = +2
Query: 149 ELIINVANNTPLDNTFRTMFQKADFENFDYNTPIVYNL 262
++I +++NNT +N ++ + ++ N +YN + YN+
Sbjct: 79 KIISSLSNNTIHNNNYKYNYNNNNYNNNNYNKKLYYNI 116
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 29.5 bits (63), Expect = 0.017
Identities = 10/38 (26%), Positives = 24/38 (63%)
Frame = +2
Query: 149 ELIINVANNTPLDNTFRTMFQKADFENFDYNTPIVYNL 262
++I +++NNT +N ++ + ++ N +YN + YN+
Sbjct: 79 KIISSLSNNTIHNNNYKYNYNNNNYNNNNYNKKLYYNI 116
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 25.8 bits (54), Expect = 0.21
Identities = 22/65 (33%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Frame = +1
Query: 136 VSVEGIDYKCGQQHTA*QHV*NNVSKSRF*KFRLQYTDCVQFKNKNF--NNVQRENKSCS 309
V+ E K G A V NN+ S L Y D QF N + NNVQ E
Sbjct: 245 VAGESFTVKNGIYGIALSPVTNNLYYSPLLSHGLYYVDTEQFSNPQYEENNVQYEGSQDI 304
Query: 310 QQTRS 324
T+S
Sbjct: 305 LNTQS 309
Score = 21.4 bits (43), Expect = 4.5
Identities = 8/37 (21%), Positives = 20/37 (54%)
Frame = +1
Query: 235 LQYTDCVQFKNKNFNNVQRENKSCSQQTRSI*RSNDQ 345
++ T C ++ N+N N +N++ Q + +++Q
Sbjct: 414 MRNTRCGRYHNQNAGNQNADNQNADNQNANNQNADNQ 450
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 1.1
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +2
Query: 149 ELIINVANNTPLDNTFRTMFQKADFENFDYNTPIVYNL 262
++I +++NNT +N + K ++ N +YN + YN+
Sbjct: 80 KIISSLSNNTIHNNNY-----KYNYNNNNYNKKLYYNI 112
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 1.1
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +2
Query: 149 ELIINVANNTPLDNTFRTMFQKADFENFDYNTPIVYNL 262
++I +++NNT +N + K ++ N +YN + YN+
Sbjct: 80 KIISSLSNNTIHNNNY-----KYNYNNNNYNKKLYYNI 112
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 1.1
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +2
Query: 149 ELIINVANNTPLDNTFRTMFQKADFENFDYNTPIVYNL 262
++I +++NNT +N + K ++ N +YN + YN+
Sbjct: 80 KIISSLSNNTIHNNNY-----KYNYNNNNYNKKLYYNI 112
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 1.1
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +2
Query: 149 ELIINVANNTPLDNTFRTMFQKADFENFDYNTPIVYNL 262
++I +++NNT +N + K ++ N +YN + YN+
Sbjct: 80 KIISSLSNNTIHNNNY-----KYNYNNNNYNKKLYYNI 112
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.0
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = +2
Query: 164 VANNTPLDNTFRTMFQKADFENFDYNTPIVYNL 262
++NN PL N + ++ +YN + YN+
Sbjct: 82 ISNNNPLSNNYNYNNNYNNYNKHNYN-KLYYNI 113
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 22.2 bits (45), Expect = 2.6
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -3
Query: 207 NIVLNVLSSG-VLLATFIINSLHANERCSGDTS-ISSPFSICHRI 79
N++ N +G LLA + + NE CSG TS +C R+
Sbjct: 89 NVITNKTGNGGPLLAPYPDWTWAKNENCSGITSAYKIEIDMCDRL 133
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.8 bits (44), Expect = 3.4
Identities = 11/39 (28%), Positives = 16/39 (41%)
Frame = -3
Query: 156 INSLHANERCSGDTSISSPFSICHRIDSHILTTTAIWRP 40
+N+ N + SSP +DS + T A W P
Sbjct: 538 VNNNSGNGNTNSSARDSSPAIESISVDSGSINTVAEWEP 576
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.8 bits (44), Expect = 3.4
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2
Query: 97 QYLPSYRFPHIDNNSN 50
+YL S F H D N+N
Sbjct: 235 EYLVSIMFSHYDRNNN 250
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 21.4 bits (43), Expect = 4.5
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 264 KQKL*QCTTRE*ELLSTDPLDLTIKRPMLILP 359
+Q L + R E + DP D T K+P ++ P
Sbjct: 168 QQLLRRAQIRRNERRTPDPHDETAKKPRVLSP 199
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.0 bits (42), Expect = 6.0
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = -2
Query: 430 RTVCVGKDDQHVQQNNTNKEQKYI 359
R C+G + + ++NT + +YI
Sbjct: 376 RNSCLGSTETYYSKHNTQQFTQYI 399
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 20.6 bits (41), Expect = 7.9
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = -3
Query: 201 VLNVLSSGVLLATFIINSLHANERCSGDTSISSPFSICHRIDSH 70
+L G L I L+ N GD I SP +D H
Sbjct: 347 ILEPAKKGFKLKQGIQFHLYINTAPCGDARIFSPHEENESVDKH 390
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 20.6 bits (41), Expect = 7.9
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -3
Query: 156 INSLHANERCSGDTSISSPFSI 91
+N L N RC + +PF I
Sbjct: 407 VNELILNTRCENPDNDRTPFKI 428
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 20.6 bits (41), Expect = 7.9
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -2
Query: 94 YLPSYRFPHIDNNSNMATKRFFSGESSGEPL 2
Y P + D+ ++ KRF S +S E L
Sbjct: 389 YYPYHPSTQEDSEEHLTPKRFHSRAASKEDL 419
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 20.6 bits (41), Expect = 7.9
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -2
Query: 94 YLPSYRFPHIDNNSNMATKRFFSGESSGEPL 2
Y P + D+ ++ KRF S +S E L
Sbjct: 389 YYPYHPSTQEDSEEHLTPKRFHSRAASKEDL 419
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 20.6 bits (41), Expect = 7.9
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = +2
Query: 203 MFQKADFENFDYNTPIVYNLKTKTLTMYNERIRA 304
MF+ DF D + + KT T Y+ ++A
Sbjct: 1026 MFETVDFSKEDGKEHHLQIMNLKTYTQYSVVVQA 1059
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 20.6 bits (41), Expect = 7.9
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -3
Query: 156 INSLHANERCSGDTSISSPFSI 91
+N L N RC + +PF I
Sbjct: 407 VNELILNTRCENPDNDRTPFKI 428
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 20.6 bits (41), Expect = 7.9
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -3
Query: 156 INSLHANERCSGDTSISSPFSI 91
+N L N RC + +PF I
Sbjct: 407 VNELILNTRCENPDNDRTPFKI 428
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,948
Number of Sequences: 438
Number of extensions: 2954
Number of successful extensions: 21
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11450997
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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