Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc21g05
(576 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 32 0.34
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 31 0.78
AF063007-7|AAC16428.1| 659|Caenorhabditis elegans Hypothetical ... 29 1.8
AF000196-9|AAO61448.1| 395|Caenorhabditis elegans Hypothetical ... 29 3.1
AF000196-8|AAL11096.1| 624|Caenorhabditis elegans Hypothetical ... 29 3.1
AF000196-7|AAC24251.2| 706|Caenorhabditis elegans Hypothetical ... 29 3.1
Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical pr... 28 4.1
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 4.1
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 28 4.1
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 28 4.1
AF039720-11|AAK68359.1| 260|Caenorhabditis elegans Hypothetical... 28 4.1
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 28 4.1
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 28 4.1
Z70752-3|CAA94755.3| 654|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 27 9.5
U50313-2|AAY86230.1| 883|Caenorhabditis elegans Inositol 1,4,5-... 27 9.5
U50313-1|AAY86229.1| 923|Caenorhabditis elegans Inositol 1,4,5-... 27 9.5
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 31.9 bits (69), Expect = 0.34
Identities = 31/107 (28%), Positives = 43/107 (40%), Gaps = 4/107 (3%)
Frame = +3
Query: 198 QHCSSAPSATSCWGGT*PSWCRVSRRVCASTGEGTL*PPIPKTQIGASTSTYPGCTAS*G 377
Q SS + ++ G T S ST G P T G++ ST PG + + G
Sbjct: 489 QSTSSGTTKSTTSGPTTSSGPSTVSERTLSTTSGPSTTSGPSTTSGSTVSTTPGASTTSG 548
Query: 378 PGDECTGG----CGPTVISYCVNCATTISPPTRWSGAPTTNSLPTCS 506
T G GP+ S + +T S P+ SG TT+ T S
Sbjct: 549 STQSTTSGPSTSSGPSTASR--STVSTTSGPSTTSGPSTTSGPSTTS 593
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 30.7 bits (66), Expect = 0.78
Identities = 25/77 (32%), Positives = 28/77 (36%), Gaps = 4/77 (5%)
Frame = +3
Query: 279 CASTGEGTL*PPIPKTQIGASTSTYPGCTAS*G----PGDECTGGCGPTVISYCVNCATT 446
C S G G PP P G T PG S G PG + G PT +C +C T
Sbjct: 135 CCSCGVG---PPGPSGAPG--TDGNPGNDGSPGNPGTPGQDAVGDESPTAADFCFDCPTG 189
Query: 447 ISPPTRWSGAPTTNSLP 497
P G N P
Sbjct: 190 PPGPPGKQGPKGPNGEP 206
>AF063007-7|AAC16428.1| 659|Caenorhabditis elegans Hypothetical
protein R119.5 protein.
Length = 659
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +2
Query: 443 NYFPAYQMEWCSHHEQPPH--MFSLEGRPPLP 532
N PAY +EW +H++P H + S RP P
Sbjct: 470 NVAPAYVLEWTINHDRPRHHRILSSIARPETP 501
>AF000196-9|AAO61448.1| 395|Caenorhabditis elegans Hypothetical
protein B0041.2c protein.
Length = 395
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +3
Query: 261 RVSRRVCASTGEGTL*PPIPKTQIGASTSTYPGCTAS*GPGDECTGGCGPT 413
++S+++ + E L PP P+T A+TST GP GG GP+
Sbjct: 312 QLSKKITEALIEAGLLPPQPQTSTSANTST-NHLNHRGGPPPGSDGGAGPS 361
>AF000196-8|AAL11096.1| 624|Caenorhabditis elegans Hypothetical
protein B0041.2b protein.
Length = 624
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +3
Query: 261 RVSRRVCASTGEGTL*PPIPKTQIGASTSTYPGCTAS*GPGDECTGGCGPT 413
++S+++ + E L PP P+T A+TST GP GG GP+
Sbjct: 541 QLSKKITEALIEAGLLPPQPQTSTSANTST-NHLNHRGGPPPGSDGGAGPS 590
>AF000196-7|AAC24251.2| 706|Caenorhabditis elegans Hypothetical
protein B0041.2a protein.
Length = 706
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +3
Query: 261 RVSRRVCASTGEGTL*PPIPKTQIGASTSTYPGCTAS*GPGDECTGGCGPT 413
++S+++ + E L PP P+T A+TST GP GG GP+
Sbjct: 623 QLSKKITEALIEAGLLPPQPQTSTSANTST-NHLNHRGGPPPGSDGGAGPS 672
>Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 277 YAHRQERERCSRPYQRRKLEPQRVHILAVRRAEVLETSV 393
Y+ R+ +E+ S R +EP+R H++A R E E +V
Sbjct: 3855 YSPRKSQEKPSEKSSERTVEPKRYHLIARIRHEGDEETV 3893
>Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 277 YAHRQERERCSRPYQRRKLEPQRVHILAVRRAEVLETSV 393
Y+ R+ +E+ S R +EP+R H++A R E E +V
Sbjct: 3844 YSPRKSQEKPSEKSSERTVEPKRYHLIARIRHEGDEETV 3882
>Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 277 YAHRQERERCSRPYQRRKLEPQRVHILAVRRAEVLETSV 393
Y+ R+ +E+ S R +EP+R H++A R E E +V
Sbjct: 3844 YSPRKSQEKPSEKSSERTVEPKRYHLIARIRHEGDEETV 3882
>Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical
protein K08E3.7 protein.
Length = 386
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 413 CHFLLCQLCDNYFPAYQMEWCSHHEQPPHMFSL 511
C+ + CQ C + Q+E QPPH F++
Sbjct: 206 CNHITCQFCFRDYLLSQLERFGFVNQPPHGFTI 238
>Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 277 YAHRQERERCSRPYQRRKLEPQRVHILAVRRAEVLETSV 393
Y+ R+ +E+ S R +EP+R H++A R E E +V
Sbjct: 3855 YSPRKSQEKPSEKSSERTVEPKRYHLIARIRHEGDEETV 3893
>Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 277 YAHRQERERCSRPYQRRKLEPQRVHILAVRRAEVLETSV 393
Y+ R+ +E+ S R +EP+R H++A R E E +V
Sbjct: 3844 YSPRKSQEKPSEKSSERTVEPKRYHLIARIRHEGDEETV 3882
>Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 277 YAHRQERERCSRPYQRRKLEPQRVHILAVRRAEVLETSV 393
Y+ R+ +E+ S R +EP+R H++A R E E +V
Sbjct: 3844 YSPRKSQEKPSEKSSERTVEPKRYHLIARIRHEGDEETV 3882
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 28.3 bits (60), Expect = 4.1
Identities = 25/74 (33%), Positives = 33/74 (44%)
Frame = +3
Query: 285 STGEGTL*PPIPKTQIGASTSTYPGCTAS*GPGDECTGGCGPTVISYCVNCATTISPPTR 464
ST GT+ I ++ ASTS+ G T + G T G P+ S TI+P
Sbjct: 1929 STSSGTVGSTISESSTAASTSSQTGSTVTIG----STSGTNPS--SPRSLSQITITPSPS 1982
Query: 465 WSGAPTTNSLPTCS 506
S T SLP+ S
Sbjct: 1983 QSTESTQTSLPSSS 1996
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -3
Query: 403 QPPVHSSPGPQLAVQP--GYVLVEAPICVFGMGGYNVPSPVDAH 278
QP V SP Q+ +P G+ + AP+ +G +P P + H
Sbjct: 442 QPTVTVSPTHQVPSEPFVGFTVTRAPLRPLDIGSTTLPPPFNQH 485
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -3
Query: 403 QPPVHSSPGPQLAVQP--GYVLVEAPICVFGMGGYNVPSPVDAH 278
QP V SP Q+ +P G+ + AP+ +G +P P + H
Sbjct: 442 QPTVTVSPTHQVPSEPFVGFTVTRAPLRPLDIGSTTLPPPFNQH 485
>AF039720-11|AAK68359.1| 260|Caenorhabditis elegans Hypothetical
protein F33D11.12 protein.
Length = 260
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/77 (24%), Positives = 30/77 (38%)
Frame = +2
Query: 200 TLFKCTKCNKLLGRHIAELVPCQPASMRIDRRGNVVAAHTKDANWSLNEYISWLYGELRS 379
T++KC KC + C+ R+D V + N + +Y L S
Sbjct: 82 TIYKCQKCASIKPDRAHHCSVCERCIRRMDHHCPWVNNCVGEGNQKFFVLFT-MYIALLS 140
Query: 380 WRRVYWRLWADCHFLLC 430
+YW +W F+LC
Sbjct: 141 MHALYWGVW---QFVLC 154
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -3
Query: 403 QPPVHSSPGPQLAVQP--GYVLVEAPICVFGMGGYNVPSPVDAH 278
QP V SP Q+ +P G+ + AP+ +G +P P + H
Sbjct: 442 QPTVTVSPTHQVPSEPFVGFTVTRAPLRPLDIGSTTLPPPFNQH 485
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -3
Query: 403 QPPVHSSPGPQLAVQP--GYVLVEAPICVFGMGGYNVPSPVDAH 278
QP V SP Q+ +P G+ + AP+ +G +P P + H
Sbjct: 442 QPTVTVSPTHQVPSEPFVGFTVTRAPLRPLDIGSTTLPPPFNQH 485
>Z70752-3|CAA94755.3| 654|Caenorhabditis elegans Hypothetical
protein F25B3.3 protein.
Length = 654
Score = 27.9 bits (59), Expect = 5.5
Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Frame = +2
Query: 182 HYSTLATLFKCTKCNKLLGRHIAELVPCQPASMRIDR--RGNVVAAHTKDANWSLNEYIS 355
H +T T C CNKLL + + C+ + + + N VA + ++ +L
Sbjct: 496 HETTFLTPTTCNHCNKLLWGILRQGFKCKDCGLAVHSCCKSNAVAECRRKSSSNLTRAAE 555
Query: 356 WLYGELRSWR 385
W S R
Sbjct: 556 WFASPRGSMR 565
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 406 PQPPVHSSPGPQLAVQPGYVLVEAPICVFGMGG 308
P PP S P P QP V P C G GG
Sbjct: 266 PPPPACSCPPPVTMYQPCMVPQYVPRCSGGCGG 298
>U50313-2|AAY86230.1| 883|Caenorhabditis elegans Inositol
1,4,5-trisphosphate receptorinteracting protein protein
1, isoform b protein.
Length = 883
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 203 LFKCTKCNKLLGRHIAELVPCQPASMR 283
L+KC KC LL ++ +VP P +++
Sbjct: 2 LYKCCKCLALLNKNSMVIVPKDPENLK 28
>U50313-1|AAY86229.1| 923|Caenorhabditis elegans Inositol
1,4,5-trisphosphate receptorinteracting protein protein
1, isoform a protein.
Length = 923
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 203 LFKCTKCNKLLGRHIAELVPCQPASMR 283
L+KC KC LL ++ +VP P +++
Sbjct: 2 LYKCCKCLALLNKNSMVIVPKDPENLK 28
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,829,264
Number of Sequences: 27780
Number of extensions: 329250
Number of successful extensions: 1321
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1319
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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