Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc21g04
(717 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061331-1|AAL28879.1| 403|Drosophila melanogaster LD25702p pro... 30 2.7
AE014296-1025|AAF50735.1| 525|Drosophila melanogaster CG10489-P... 30 2.7
AB102715-1|BAD10843.1| 403|Drosophila melanogaster DNA polymera... 30 2.7
BT023033-1|AAY55449.1| 186|Drosophila melanogaster IP04035p pro... 29 6.3
AE013599-2059|AAF58136.1| 165|Drosophila melanogaster CG12959-P... 29 6.3
BT025842-1|ABF85742.1| 818|Drosophila melanogaster IP12350p pro... 29 8.4
BT024328-1|ABC86390.1| 593|Drosophila melanogaster IP10742p pro... 29 8.4
BT022956-1|AAY55372.1| 148|Drosophila melanogaster IP04235p pro... 29 8.4
AY069653-1|AAL39798.1| 713|Drosophila melanogaster LD42374p pro... 29 8.4
AE013599-1154|AAF58768.1| 713|Drosophila melanogaster CG11883-P... 29 8.4
AE013599-1153|AAF58767.1| 732|Drosophila melanogaster CG11883-P... 29 8.4
>AY061331-1|AAL28879.1| 403|Drosophila melanogaster LD25702p
protein.
Length = 403
Score = 30.3 bits (65), Expect = 2.7
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +3
Query: 534 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFXTVYGAV 689
++DLP + E + ++ D PP A++ PF S LR G +
Sbjct: 171 RLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELRHHLDALGGL 222
>AE014296-1025|AAF50735.1| 525|Drosophila melanogaster CG10489-PA
protein.
Length = 525
Score = 30.3 bits (65), Expect = 2.7
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +3
Query: 534 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFXTVYGAV 689
++DLP + E + ++ D PP A++ PF S LR G +
Sbjct: 293 RLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELRHHLDALGGL 344
>AB102715-1|BAD10843.1| 403|Drosophila melanogaster DNA polymerase
epsilon secondsubunit protein.
Length = 403
Score = 30.3 bits (65), Expect = 2.7
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +3
Query: 534 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFXTVYGAV 689
++DLP + E + ++ D PP A++ PF S LR G +
Sbjct: 171 RLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELRHHLDALGGL 222
>BT023033-1|AAY55449.1| 186|Drosophila melanogaster IP04035p
protein.
Length = 186
Score = 29.1 bits (62), Expect = 6.3
Identities = 21/84 (25%), Positives = 34/84 (40%)
Frame = +1
Query: 79 VSNRLHTSVCLHAQYKNACQNGALTGQVSPSSQNTNIIRHQSLWTFIRIRGTKSLQQ*VR 258
++ L ++ LH ++ +NGA + P N + H +T+ +I Q +R
Sbjct: 41 LTGTLTNALRLHLPHR---RNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILR 97
Query: 259 VRRSHGLRPSICSLTMSAVCCSKL 330
GLR IC L C L
Sbjct: 98 GHTRQGLRCRICKLNAHGDCAPNL 121
>AE013599-2059|AAF58136.1| 165|Drosophila melanogaster CG12959-PA
protein.
Length = 165
Score = 29.1 bits (62), Expect = 6.3
Identities = 21/84 (25%), Positives = 34/84 (40%)
Frame = +1
Query: 79 VSNRLHTSVCLHAQYKNACQNGALTGQVSPSSQNTNIIRHQSLWTFIRIRGTKSLQQ*VR 258
++ L ++ LH ++ +NGA + P N + H +T+ +I Q +R
Sbjct: 27 LTGTLTNALRLHLPHR---RNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILR 83
Query: 259 VRRSHGLRPSICSLTMSAVCCSKL 330
GLR IC L C L
Sbjct: 84 GHTRQGLRCRICKLNAHGDCAPNL 107
>BT025842-1|ABF85742.1| 818|Drosophila melanogaster IP12350p
protein.
Length = 818
Score = 28.7 bits (61), Expect = 8.4
Identities = 18/65 (27%), Positives = 25/65 (38%)
Frame = +1
Query: 136 QNGALTGQVSPSSQNTNIIRHQSLWTFIRIRGTKSLQQ*VRVRRSHGLRPSICSLTMSAV 315
+NGA + P N + H +T+ +I Q +R GLR IC L
Sbjct: 689 RNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILRGHTRQGLRCRICKLNAHGD 748
Query: 316 CCSKL 330
C L
Sbjct: 749 CAPNL 753
>BT024328-1|ABC86390.1| 593|Drosophila melanogaster IP10742p
protein.
Length = 593
Score = 28.7 bits (61), Expect = 8.4
Identities = 18/65 (27%), Positives = 25/65 (38%)
Frame = +1
Query: 136 QNGALTGQVSPSSQNTNIIRHQSLWTFIRIRGTKSLQQ*VRVRRSHGLRPSICSLTMSAV 315
+NGA + P N + H +T+ +I Q +R GLR IC L
Sbjct: 464 RNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILRGHTRQGLRCRICKLNAHGD 523
Query: 316 CCSKL 330
C L
Sbjct: 524 CAPNL 528
>BT022956-1|AAY55372.1| 148|Drosophila melanogaster IP04235p
protein.
Length = 148
Score = 28.7 bits (61), Expect = 8.4
Identities = 18/65 (27%), Positives = 25/65 (38%)
Frame = +1
Query: 136 QNGALTGQVSPSSQNTNIIRHQSLWTFIRIRGTKSLQQ*VRVRRSHGLRPSICSLTMSAV 315
+NGA + P N + H +T+ +I Q +R GLR IC L
Sbjct: 26 RNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILRGHTRQGLRCRICKLNAHGD 85
Query: 316 CCSKL 330
C L
Sbjct: 86 CAPNL 90
>AY069653-1|AAL39798.1| 713|Drosophila melanogaster LD42374p
protein.
Length = 713
Score = 28.7 bits (61), Expect = 8.4
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -3
Query: 634 VTKGLEARTAAGGCGSTRSGTSEMFSKIEGRSTFSSNQLEK 512
V++ R GCGS SG+ + + GRST S+QLEK
Sbjct: 83 VSQPQSPRHRGSGCGSV-SGSRIITHGLTGRSTSISSQLEK 122
>AE013599-1154|AAF58768.1| 713|Drosophila melanogaster CG11883-PB,
isoform B protein.
Length = 713
Score = 28.7 bits (61), Expect = 8.4
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -3
Query: 634 VTKGLEARTAAGGCGSTRSGTSEMFSKIEGRSTFSSNQLEK 512
V++ R GCGS SG+ + + GRST S+QLEK
Sbjct: 83 VSQPQSPRHRGSGCGSV-SGSRIITHGLTGRSTSISSQLEK 122
>AE013599-1153|AAF58767.1| 732|Drosophila melanogaster CG11883-PA,
isoform A protein.
Length = 732
Score = 28.7 bits (61), Expect = 8.4
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -3
Query: 634 VTKGLEARTAAGGCGSTRSGTSEMFSKIEGRSTFSSNQLEK 512
V++ R GCGS SG+ + + GRST S+QLEK
Sbjct: 83 VSQPQSPRHRGSGCGSV-SGSRIITHGLTGRSTSISSQLEK 122
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,067,750
Number of Sequences: 53049
Number of extensions: 637788
Number of successful extensions: 1675
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1675
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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