Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc21f08
(356 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF300704-1|AAG24400.1| 622|Caenorhabditis elegans incenp-like p... 30 0.41
AC025716-5|AAK39616.1| 622|Caenorhabditis elegans Incenp homolo... 30 0.41
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 29 0.72
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 29 0.72
U82936-1|AAB40869.1| 682|Caenorhabditis elegans protein kinase ... 29 1.3
U82935-1|AAB40868.1| 680|Caenorhabditis elegans protein kinase ... 29 1.3
U29376-5|AAA68709.2| 936|Caenorhabditis elegans Protein kinase ... 29 1.3
U29376-4|AAM51504.1| 682|Caenorhabditis elegans Protein kinase ... 29 1.3
U29376-3|AAM51503.1| 680|Caenorhabditis elegans Protein kinase ... 29 1.3
AC006673-11|AAF39920.1| 311|Caenorhabditis elegans Hypothetical... 27 2.9
Z79639-6|CAB01919.3| 957|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z79639-5|CAD42645.2| 972|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z79598-9|CAB01869.3| 957|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z79598-8|CAD42646.2| 972|Caenorhabditis elegans Hypothetical pr... 27 3.9
U00049-7|AAC47054.1| 582|Caenorhabditis elegans Hypothetical pr... 27 3.9
AF519110-1|AAM74224.1| 957|Caenorhabditis elegans EOR-2B protein. 27 3.9
AF519109-1|AAM74223.1| 972|Caenorhabditis elegans EOR-2A protein. 27 3.9
AF502570-1|AAM74152.1| 972|Caenorhabditis elegans EOR-2 protein. 27 3.9
Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical pr... 27 5.1
AY551964-1|AAS65428.1| 795|Caenorhabditis elegans enhancer of p... 27 5.1
AL132904-22|CAC35840.2| 795|Caenorhabditis elegans Hypothetical... 27 5.1
AF077541-9|AAC64633.1| 909|Caenorhabditis elegans Cysteinyl trn... 26 8.9
AF077541-8|AAK68426.1| 908|Caenorhabditis elegans Cysteinyl trn... 26 8.9
>AF300704-1|AAG24400.1| 622|Caenorhabditis elegans incenp-like
protein ICP-1 protein.
Length = 622
Score = 30.3 bits (65), Expect = 0.41
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = +2
Query: 2 SVEPQNFYQSLKFIAKTKKANAKLKYADEMRDKNPECVFKRRKIIAKSRKNRRNIV 169
+V P+ ++ + F K NA++K+ADE+R K E KR K A+ + +RN V
Sbjct: 203 AVVPRTPHRVIPFNDAEKDPNARMKHADELRMK--ELEKKREK--ARKDEEKRNAV 254
>AC025716-5|AAK39616.1| 622|Caenorhabditis elegans Incenp homolog
protein 1 protein.
Length = 622
Score = 30.3 bits (65), Expect = 0.41
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = +2
Query: 2 SVEPQNFYQSLKFIAKTKKANAKLKYADEMRDKNPECVFKRRKIIAKSRKNRRNIV 169
+V P+ ++ + F K NA++K+ADE+R K E KR K A+ + +RN V
Sbjct: 203 AVVPRTPHRVIPFNDAEKDPNARMKHADELRMK--ELEKKREK--ARKDEEKRNAV 254
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 29.5 bits (63), Expect = 0.72
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +2
Query: 32 LKFIAKTKKANAKLKYADEMRDKNPECVFKRRK-IIAKSRKNRR 160
+K K +KA K++ + E+RDKN E + ++RK + KS+ +R
Sbjct: 24 VKEAPKKQKAGKKIEVSVELRDKNEEKMGRKRKHRMKKSQAEKR 67
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 29.5 bits (63), Expect = 0.72
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +2
Query: 32 LKFIAKTKKANAKLKYADEMRDKNPECVFKRRK-IIAKSRKNRR 160
+K K +KA K++ + E+RDKN E + ++RK + KS+ +R
Sbjct: 24 VKEAPKKQKAGKKIEVSVELRDKNEEKMGRKRKHRMKKSQAEKR 67
>U82936-1|AAB40869.1| 682|Caenorhabditis elegans protein kinase C2
B isoform protein.
Length = 682
Score = 28.7 bits (61), Expect = 1.3
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 87 RCATKIPNACSRDERSSRNRGRIE 158
RC +PN C D R R RIE
Sbjct: 144 RCVKNVPNMCGTDNTEKRGRLRIE 167
>U82935-1|AAB40868.1| 680|Caenorhabditis elegans protein kinase C2
A isoform protein.
Length = 680
Score = 28.7 bits (61), Expect = 1.3
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 87 RCATKIPNACSRDERSSRNRGRIE 158
RC +PN C D R R RIE
Sbjct: 144 RCVKNVPNMCGTDNTEKRGRLRIE 167
>U29376-5|AAA68709.2| 936|Caenorhabditis elegans Protein kinase c
protein 2, isoformc protein.
Length = 936
Score = 28.7 bits (61), Expect = 1.3
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 87 RCATKIPNACSRDERSSRNRGRIE 158
RC +PN C D R R RIE
Sbjct: 284 RCVKNVPNMCGTDNTEKRGRLRIE 307
>U29376-4|AAM51504.1| 682|Caenorhabditis elegans Protein kinase c
protein 2, isoformb protein.
Length = 682
Score = 28.7 bits (61), Expect = 1.3
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 87 RCATKIPNACSRDERSSRNRGRIE 158
RC +PN C D R R RIE
Sbjct: 144 RCVKNVPNMCGTDNTEKRGRLRIE 167
>U29376-3|AAM51503.1| 680|Caenorhabditis elegans Protein kinase c
protein 2, isoforma protein.
Length = 680
Score = 28.7 bits (61), Expect = 1.3
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 87 RCATKIPNACSRDERSSRNRGRIE 158
RC +PN C D R R RIE
Sbjct: 144 RCVKNVPNMCGTDNTEKRGRLRIE 167
>AC006673-11|AAF39920.1| 311|Caenorhabditis elegans Hypothetical
protein K09D9.3 protein.
Length = 311
Score = 27.5 bits (58), Expect = 2.9
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -3
Query: 195 TALSVFVLPTIFLLFFLDFAMIFRLLNTHSGFLSRISSAYFNFALAFL 52
T +S F+ IFL+FF+DF R+L S L + + NF A+L
Sbjct: 150 TKISFFI---IFLIFFVDF---LRVLALFSAILKQTPPSKINFQDAYL 191
>Z79639-6|CAB01919.3| 957|Caenorhabditis elegans Hypothetical
protein C44H4.7b protein.
Length = 957
Score = 27.1 bits (57), Expect = 3.9
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -3
Query: 135 MIFRLLNTHSGFLSRISSAYFNFALAFL 52
+++R +T+SG+ +ISS YF A+ +
Sbjct: 666 LVYRSSSTYSGWCEQISSQYFRVAVKII 693
>Z79639-5|CAD42645.2| 972|Caenorhabditis elegans Hypothetical
protein C44H4.7a protein.
Length = 972
Score = 27.1 bits (57), Expect = 3.9
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -3
Query: 135 MIFRLLNTHSGFLSRISSAYFNFALAFL 52
+++R +T+SG+ +ISS YF A+ +
Sbjct: 681 LVYRSSSTYSGWCEQISSQYFRVAVKII 708
>Z79598-9|CAB01869.3| 957|Caenorhabditis elegans Hypothetical
protein C44H4.7b protein.
Length = 957
Score = 27.1 bits (57), Expect = 3.9
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -3
Query: 135 MIFRLLNTHSGFLSRISSAYFNFALAFL 52
+++R +T+SG+ +ISS YF A+ +
Sbjct: 666 LVYRSSSTYSGWCEQISSQYFRVAVKII 693
>Z79598-8|CAD42646.2| 972|Caenorhabditis elegans Hypothetical
protein C44H4.7a protein.
Length = 972
Score = 27.1 bits (57), Expect = 3.9
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -3
Query: 135 MIFRLLNTHSGFLSRISSAYFNFALAFL 52
+++R +T+SG+ +ISS YF A+ +
Sbjct: 681 LVYRSSSTYSGWCEQISSQYFRVAVKII 708
>U00049-7|AAC47054.1| 582|Caenorhabditis elegans Hypothetical
protein C18F10.7a protein.
Length = 582
Score = 27.1 bits (57), Expect = 3.9
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 126 ERSSRNRGRIEEILLVVRKRLTQFILLDHIQKFLAFK*LRD 248
E +S RG I + R +FI+LDH ++ A + LRD
Sbjct: 168 EGASWVRGNQSYIFRLSRNGYAEFIVLDHDERIAAVQELRD 208
>AF519110-1|AAM74224.1| 957|Caenorhabditis elegans EOR-2B protein.
Length = 957
Score = 27.1 bits (57), Expect = 3.9
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -3
Query: 135 MIFRLLNTHSGFLSRISSAYFNFALAFL 52
+++R +T+SG+ +ISS YF A+ +
Sbjct: 666 LVYRSSSTYSGWCEQISSQYFRVAVKII 693
>AF519109-1|AAM74223.1| 972|Caenorhabditis elegans EOR-2A protein.
Length = 972
Score = 27.1 bits (57), Expect = 3.9
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -3
Query: 135 MIFRLLNTHSGFLSRISSAYFNFALAFL 52
+++R +T+SG+ +ISS YF A+ +
Sbjct: 681 LVYRSSSTYSGWCEQISSQYFRVAVKII 708
>AF502570-1|AAM74152.1| 972|Caenorhabditis elegans EOR-2 protein.
Length = 972
Score = 27.1 bits (57), Expect = 3.9
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -3
Query: 135 MIFRLLNTHSGFLSRISSAYFNFALAFL 52
+++R +T+SG+ +ISS YF A+ +
Sbjct: 681 LVYRSSSTYSGWCEQISSQYFRVAVKII 708
>Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical
protein T05F1.11 protein.
Length = 676
Score = 26.6 bits (56), Expect = 5.1
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 47 KTKKANAKLKYADEMRDKNPECVFKRRKIIAKSRK 151
K K AK+K EMR+K + KRR+ +++ K
Sbjct: 483 KRKNEEAKIKLEAEMREKAEQAEIKRREEKSRALK 517
>AY551964-1|AAS65428.1| 795|Caenorhabditis elegans enhancer of
polycomb protein.
Length = 795
Score = 26.6 bits (56), Expect = 5.1
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 101 NPECVFKRRKIIAKSRKNRRNIVGS-TKTLNAVH 199
NP F+RR ++RKNR+N S K L VH
Sbjct: 219 NPYVAFRRRAEKMQTRKNRKNDEDSYEKILKLVH 252
>AL132904-22|CAC35840.2| 795|Caenorhabditis elegans Hypothetical
protein Y111B2A.11 protein.
Length = 795
Score = 26.6 bits (56), Expect = 5.1
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 101 NPECVFKRRKIIAKSRKNRRNIVGS-TKTLNAVH 199
NP F+RR ++RKNR+N S K L VH
Sbjct: 219 NPYVAFRRRAEKMQTRKNRKNDEDSYEKILKLVH 252
>AF077541-9|AAC64633.1| 909|Caenorhabditis elegans Cysteinyl trna
synthetase protein1, isoform a protein.
Length = 909
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 20 FYQSLKFIAKTKKANAKLKYADEMRDK 100
F + ++ IAK K N L+ D +RDK
Sbjct: 765 FREKVRLIAKEHKVNGILEECDTLRDK 791
>AF077541-8|AAK68426.1| 908|Caenorhabditis elegans Cysteinyl trna
synthetase protein1, isoform b protein.
Length = 908
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 20 FYQSLKFIAKTKKANAKLKYADEMRDK 100
F + ++ IAK K N L+ D +RDK
Sbjct: 764 FREKVRLIAKEHKVNGILEECDTLRDK 790
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,789,633
Number of Sequences: 27780
Number of extensions: 115554
Number of successful extensions: 358
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 358
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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