Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc21f08
(356 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein. 23 1.1
DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein. 23 1.1
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 5.8
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 5.8
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 5.8
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 5.8
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 5.8
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 21 5.8
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 21 5.8
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 21 5.8
AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin prot... 21 5.8
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 21 5.8
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 20 7.6
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 20 7.6
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 20 7.6
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 20 7.6
>DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein.
Length = 135
Score = 23.0 bits (47), Expect = 1.1
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 83 DEMRDKNPECVFKRRKIIAKSRKNRRNIV 169
DE + EC+ K+ I+ +S + NIV
Sbjct: 56 DEKPQRYNECILKQFNIVDESGNFKENIV 84
>DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein.
Length = 135
Score = 23.0 bits (47), Expect = 1.1
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 83 DEMRDKNPECVFKRRKIIAKSRKNRRNIV 169
DE + EC+ K+ I+ +S + NIV
Sbjct: 56 DEKPQRYNECILKQFNIVDESGNFKENIV 84
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 5.8
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 229 LLSNYEIAHNNLYKNTHCLNRSLIKHKY 312
L +NY+ ++ N Y N + N + K +Y
Sbjct: 85 LSNNYKYSNYNNYNNNNYNNNNYKKLQY 112
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 5.8
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 229 LLSNYEIAHNNLYKNTHCLNRSLIKHKY 312
L +NY+ ++ N Y N + N + K +Y
Sbjct: 85 LSNNYKYSNYNNYNNNNYNNNNYKKLQY 112
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 5.8
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 229 LLSNYEIAHNNLYKNTHCLNRSLIKHKY 312
L +NY+ ++ N Y N + N + K +Y
Sbjct: 85 LSNNYKYSNYNNYNNNNYNNNNYKKLQY 112
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 5.8
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 229 LLSNYEIAHNNLYKNTHCLNRSLIKHKY 312
L +NY+ ++ N Y N + N + K +Y
Sbjct: 85 LSNNYKYSNYNNYNNNNYNNNNYKKLQY 112
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 20.6 bits (41), Expect = 5.8
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 232 LSNYEIAHNNLYKNTHCLNRSLIKHKY 312
LSN I +NN Y N + N + + Y
Sbjct: 85 LSNKTIHNNNNYNNNNYNNYNYNNNNY 111
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.6 bits (41), Expect = 5.8
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 232 LSNYEIAHNNLYKN 273
LSN I +NN YKN
Sbjct: 318 LSNKTIHNNNNYKN 331
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 20.6 bits (41), Expect = 5.8
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +1
Query: 262 LYKNTHCLNRS 294
L +NTHC+N +
Sbjct: 408 LIRNTHCVNNN 418
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 20.6 bits (41), Expect = 5.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 138 RNRGRIEEILLVVRKRLTQF 197
R + +EEIL ++K+ T+F
Sbjct: 118 RGKKSLEEILDEIKKKTTRF 137
>AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin
protein.
Length = 215
Score = 20.6 bits (41), Expect = 5.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 138 RNRGRIEEILLVVRKRLTQF 197
R + +EEIL ++K+ T+F
Sbjct: 118 RGKKSLEEILDEIKKKTTRF 137
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 20.6 bits (41), Expect = 5.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 138 RNRGRIEEILLVVRKRLTQF 197
R + +EEIL ++K+ T+F
Sbjct: 118 RGKKSLEEILDEIKKKTTRF 137
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.2 bits (40), Expect = 7.6
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 232 LSNYEIAHNNLYKNTHCLN 288
LSN +NN YK +C N
Sbjct: 85 LSNNYNYNNNNYKKLYCNN 103
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.2 bits (40), Expect = 7.6
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 232 LSNYEIAHNNLYKNTHCLN 288
LSN +NN YK +C N
Sbjct: 85 LSNNYNYNNNNYKKLYCNN 103
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.2 bits (40), Expect = 7.6
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 232 LSNYEIAHNNLYKNTHCLN 288
LSN +NN YK +C N
Sbjct: 85 LSNNYNYNNNNYKKLYCNN 103
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 20.2 bits (40), Expect = 7.6
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 256 NNLYKNTHC 282
NNL KNT C
Sbjct: 409 NNLIKNTRC 417
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,230
Number of Sequences: 438
Number of extensions: 1779
Number of successful extensions: 22
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8308335
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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