Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc21e13
         (556 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    23   6.7  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   6.7  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   6.7  

>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 194 TFCCAYLFLIIMHYLAGVLA 253
           TF C YLF II   + G+++
Sbjct: 233 TFICLYLFFIITLSIYGLMS 252


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -1

Query: 556  PPKLYEYKIGWIMI 515
            PP+L+EY   W+++
Sbjct: 3189 PPRLFEYVDSWLLL 3202


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +3

Query: 330  PKSVR*RHKRRL*DGIQRYFRSQ 398
            P++VR RH+RRL   +QR +R +
Sbjct: 1130 PRTVRARHERRL--YLQRLYRQR 1150


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,192
Number of Sequences: 2352
Number of extensions: 9751
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51722361
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)